Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CR55 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CR55 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CR55 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CR55 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Q9CR55 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.32■□□□□ 0.84
Q9CR55 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q9CR55 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CR55 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CR55 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CR55 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CR55 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q9CR55 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Q9CR55 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CR55 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CR55 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.3■□□□□ 0.84
Q9CR55 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.3■□□□□ 0.84
Q9CR55 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CR55 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q9CR55 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.29■□□□□ 0.84
Q9CR55 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q9CR55 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CR55 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CR55 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CR55 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CR55 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q9CR55 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q9CR55 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q9CR55 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Q9CR55 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Q9CR55 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CR55 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CR55 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CR55 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CR55 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CR55 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CR55 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Q9CR55 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.26■□□□□ 0.83
Q9CR55 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q9CR55 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CR55 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CR55 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CR55 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CR55 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.25■□□□□ 0.83
Q9CR55 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CR55 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.25■□□□□ 0.83
Q9CR55 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CR55 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CR55 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.25■□□□□ 0.83
Q9CR55 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CR55 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CR55 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CR55 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CR55 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CR55 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.24■□□□□ 0.83
Q9CR55 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CR55 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CR55 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Q9CR55 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q9CR55 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q9CR55 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Q9CR55 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Q9CR55 Iqck-206ENSMUST00000208658 2891 ntBASIC20.23■□□□□ 0.83
Q9CR55 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Q9CR55 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CR55 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CR55 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CR55 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CR55 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CR55 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CR55 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CR55 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CR55 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CR55 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CR55 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CR55 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CR55 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CR55 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CR55 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CR55 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Q9CR55 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CR55 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CR55 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CR55 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CR55 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9CR55 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.19■□□□□ 0.82
Q9CR55 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.19■□□□□ 0.82
Q9CR55 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Q9CR55 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9CR55 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms