Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.31■■□□□ 1.16
Retreg3Q9CQV4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retreg3Q9CQV4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retreg3Q9CQV4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Retreg3Q9CQV4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retreg3Q9CQV4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retreg3Q9CQV4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retreg3Q9CQV4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.3■■□□□ 1.16
Retreg3Q9CQV4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.3■■□□□ 1.16
Retreg3Q9CQV4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Retreg3Q9CQV4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retreg3Q9CQV4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Retreg3Q9CQV4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retreg3Q9CQV4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retreg3Q9CQV4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retreg3Q9CQV4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retreg3Q9CQV4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retreg3Q9CQV4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg3Q9CQV4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retreg3Q9CQV4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.27■■□□□ 1.16
Retreg3Q9CQV4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retreg3Q9CQV4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retreg3Q9CQV4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retreg3Q9CQV4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retreg3Q9CQV4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.26■■□□□ 1.15
Retreg3Q9CQV4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.26■■□□□ 1.15
Retreg3Q9CQV4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retreg3Q9CQV4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Retreg3Q9CQV4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg3Q9CQV4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg3Q9CQV4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Retreg3Q9CQV4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg3Q9CQV4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg3Q9CQV4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Retreg3Q9CQV4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Retreg3Q9CQV4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
Retreg3Q9CQV4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retreg3Q9CQV4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retreg3Q9CQV4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retreg3Q9CQV4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retreg3Q9CQV4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Retreg3Q9CQV4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Retreg3Q9CQV4 Gm7332-201ENSMUST00000118351 454 ntBASIC22.22■■□□□ 1.15
Retreg3Q9CQV4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retreg3Q9CQV4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retreg3Q9CQV4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retreg3Q9CQV4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retreg3Q9CQV4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.21■■□□□ 1.15
Retreg3Q9CQV4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retreg3Q9CQV4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retreg3Q9CQV4 Gm14523-201ENSMUST00000117260 558 ntBASIC22.2■■□□□ 1.14
Retreg3Q9CQV4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retreg3Q9CQV4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Retreg3Q9CQV4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg3Q9CQV4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg3Q9CQV4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg3Q9CQV4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg3Q9CQV4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg3Q9CQV4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Retreg3Q9CQV4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg3Q9CQV4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg3Q9CQV4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Retreg3Q9CQV4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.18■■□□□ 1.14
Retreg3Q9CQV4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retreg3Q9CQV4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Retreg3Q9CQV4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.18■■□□□ 1.14
Retreg3Q9CQV4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retreg3Q9CQV4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.17■■□□□ 1.14
Retreg3Q9CQV4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.17■■□□□ 1.14
Retreg3Q9CQV4 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.17■■□□□ 1.14
Retreg3Q9CQV4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.17■■□□□ 1.14
Retreg3Q9CQV4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retreg3Q9CQV4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Retreg3Q9CQV4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Retreg3Q9CQV4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Retreg3Q9CQV4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retreg3Q9CQV4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retreg3Q9CQV4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg3Q9CQV4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg3Q9CQV4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.15■■□□□ 1.14
Retreg3Q9CQV4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.15■■□□□ 1.14
Retreg3Q9CQV4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg3Q9CQV4 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.15■■□□□ 1.14
Retreg3Q9CQV4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg3Q9CQV4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retreg3Q9CQV4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Retreg3Q9CQV4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retreg3Q9CQV4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retreg3Q9CQV4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retreg3Q9CQV4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retreg3Q9CQV4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.13■■□□□ 1.13
Retreg3Q9CQV4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms