Protein–RNA interactions for Protein: Q9CQ82

Itgb3bp, Centromere protein R, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3bpQ9CQ82 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb3bpQ9CQ82 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb3bpQ9CQ82 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb3bpQ9CQ82 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb3bpQ9CQ82 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itgb3bpQ9CQ82 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.3■□□□□ 0.84
Itgb3bpQ9CQ82 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb3bpQ9CQ82 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb3bpQ9CQ82 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb3bpQ9CQ82 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb3bpQ9CQ82 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb3bpQ9CQ82 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itgb3bpQ9CQ82 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb3bpQ9CQ82 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb3bpQ9CQ82 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb3bpQ9CQ82 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb3bpQ9CQ82 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb3bpQ9CQ82 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.28■□□□□ 0.84
Itgb3bpQ9CQ82 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Itgb3bpQ9CQ82 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Itgb3bpQ9CQ82 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itgb3bpQ9CQ82 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itgb3bpQ9CQ82 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itgb3bpQ9CQ82 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itgb3bpQ9CQ82 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itgb3bpQ9CQ82 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.27■□□□□ 0.83
Itgb3bpQ9CQ82 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Itgb3bpQ9CQ82 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb3bpQ9CQ82 Gm8503-201ENSMUST00000118131 455 ntBASIC20.26■□□□□ 0.83
Itgb3bpQ9CQ82 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb3bpQ9CQ82 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Itgb3bpQ9CQ82 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itgb3bpQ9CQ82 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Itgb3bpQ9CQ82 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.25■□□□□ 0.83
Itgb3bpQ9CQ82 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Itgb3bpQ9CQ82 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Itgb3bpQ9CQ82 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itgb3bpQ9CQ82 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itgb3bpQ9CQ82 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itgb3bpQ9CQ82 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itgb3bpQ9CQ82 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Itgb3bpQ9CQ82 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itgb3bpQ9CQ82 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.23■□□□□ 0.83
Itgb3bpQ9CQ82 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Itgb3bpQ9CQ82 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Itgb3bpQ9CQ82 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Itgb3bpQ9CQ82 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Itgb3bpQ9CQ82 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.22■□□□□ 0.83
Itgb3bpQ9CQ82 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Itgb3bpQ9CQ82 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Itgb3bpQ9CQ82 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Itgb3bpQ9CQ82 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.21■□□□□ 0.83
Itgb3bpQ9CQ82 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Itgb3bpQ9CQ82 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Itgb3bpQ9CQ82 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Itgb3bpQ9CQ82 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Itgb3bpQ9CQ82 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Itgb3bpQ9CQ82 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.21■□□□□ 0.83
Itgb3bpQ9CQ82 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Itgb3bpQ9CQ82 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Itgb3bpQ9CQ82 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Itgb3bpQ9CQ82 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.2■□□□□ 0.82
Itgb3bpQ9CQ82 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.2■□□□□ 0.82
Itgb3bpQ9CQ82 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Itgb3bpQ9CQ82 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Itgb3bpQ9CQ82 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Itgb3bpQ9CQ82 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Itgb3bpQ9CQ82 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Itgb3bpQ9CQ82 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Itgb3bpQ9CQ82 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.19■□□□□ 0.82
Itgb3bpQ9CQ82 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Itgb3bpQ9CQ82 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Itgb3bpQ9CQ82 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Itgb3bpQ9CQ82 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Itgb3bpQ9CQ82 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.18■□□□□ 0.82
Itgb3bpQ9CQ82 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Itgb3bpQ9CQ82 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Itgb3bpQ9CQ82 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Itgb3bpQ9CQ82 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Itgb3bpQ9CQ82 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.16■□□□□ 0.82
Itgb3bpQ9CQ82 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Itgb3bpQ9CQ82 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Itgb3bpQ9CQ82 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Itgb3bpQ9CQ82 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Itgb3bpQ9CQ82 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Itgb3bpQ9CQ82 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Itgb3bpQ9CQ82 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Itgb3bpQ9CQ82 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms