Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdha3Q91Y16 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdha3Q91Y16 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Gm12366-201ENSMUST00000121722 873 ntBASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Gm44428-201ENSMUST00000204474 874 ntBASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Gm5786-201ENSMUST00000085368 882 ntBASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdha3Q91Y16 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdha3Q91Y16 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.08■■□□□ 1.29
Pcdha3Q91Y16 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdha3Q91Y16 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.08■■□□□ 1.29
Pcdha3Q91Y16 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdha3Q91Y16 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.08■■□□□ 1.29
Pcdha3Q91Y16 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdha3Q91Y16 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.07■■□□□ 1.28
Pcdha3Q91Y16 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdha3Q91Y16 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdha3Q91Y16 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Pcdha3Q91Y16 Gm27502-201ENSMUST00000183495 199 ntBASIC23.06■■□□□ 1.28
Pcdha3Q91Y16 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdha3Q91Y16 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdha3Q91Y16 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdha3Q91Y16 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdha3Q91Y16 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdha3Q91Y16 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdha3Q91Y16 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdha3Q91Y16 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Pcdha3Q91Y16 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Gm14523-201ENSMUST00000117260 558 ntBASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Pcdha3Q91Y16 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdha3Q91Y16 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Pcdha3Q91Y16 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdha3Q91Y16 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdha3Q91Y16 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdha3Q91Y16 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdha3Q91Y16 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdha3Q91Y16 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdha3Q91Y16 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdha3Q91Y16 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.02■■□□□ 1.28
Pcdha3Q91Y16 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Gm7332-201ENSMUST00000118351 454 ntBASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.01■■□□□ 1.27
Pcdha3Q91Y16 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdha3Q91Y16 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23■■□□□ 1.27
Pcdha3Q91Y16 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdha3Q91Y16 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdha3Q91Y16 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdha3Q91Y16 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdha3Q91Y16 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.99■■□□□ 1.27
Pcdha3Q91Y16 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.99■■□□□ 1.27
Pcdha3Q91Y16 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Pcdha3Q91Y16 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pcdha3Q91Y16 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Pcdha3Q91Y16 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Pcdha3Q91Y16 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.98■■□□□ 1.27
Pcdha3Q91Y16 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.98■■□□□ 1.27
Pcdha3Q91Y16 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdha3Q91Y16 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Pcdha3Q91Y16 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdha3Q91Y16 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
Pcdha3Q91Y16 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdha3Q91Y16 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdha3Q91Y16 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.97■■□□□ 1.27
Pcdha3Q91Y16 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdha3Q91Y16 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdha3Q91Y16 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdha3Q91Y16 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Pcdha3Q91Y16 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Pcdha3Q91Y16 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdha3Q91Y16 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.95■■□□□ 1.26
Pcdha3Q91Y16 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.95■■□□□ 1.26
Pcdha3Q91Y16 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.95■■□□□ 1.26
Pcdha3Q91Y16 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdha3Q91Y16 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdha3Q91Y16 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdha3Q91Y16 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Pcdha3Q91Y16 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdha3Q91Y16 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Pcdha3Q91Y16 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdha3Q91Y16 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Pcdha3Q91Y16 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms