Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb1Q91XX8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb1Q91XX8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Pcdhgb1Q91XX8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdhgb1Q91XX8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdhgb1Q91XX8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb1Q91XX8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb1Q91XX8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb1Q91XX8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.95■■□□□ 1.26
Pcdhgb1Q91XX8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Pcdhgb1Q91XX8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.95■■□□□ 1.26
Pcdhgb1Q91XX8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb1Q91XX8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Pcdhgb1Q91XX8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Pcdhgb1Q91XX8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Pcdhgb1Q91XX8 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.92■■□□□ 1.26
Pcdhgb1Q91XX8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb1Q91XX8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb1Q91XX8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb1Q91XX8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb1Q91XX8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.92■■□□□ 1.26
Pcdhgb1Q91XX8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb1Q91XX8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb1Q91XX8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhgb1Q91XX8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb1Q91XX8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb1Q91XX8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb1Q91XX8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdhgb1Q91XX8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdhgb1Q91XX8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb1Q91XX8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb1Q91XX8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb1Q91XX8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb1Q91XX8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb1Q91XX8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb1Q91XX8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhgb1Q91XX8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb1Q91XX8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb1Q91XX8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb1Q91XX8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.89■■□□□ 1.25
Pcdhgb1Q91XX8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb1Q91XX8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb1Q91XX8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Pcdhgb1Q91XX8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb1Q91XX8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb1Q91XX8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.88■■□□□ 1.25
Pcdhgb1Q91XX8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb1Q91XX8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb1Q91XX8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb1Q91XX8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb1Q91XX8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.87■■□□□ 1.25
Pcdhgb1Q91XX8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdhgb1Q91XX8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdhgb1Q91XX8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb1Q91XX8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdhgb1Q91XX8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 Gm13238-201ENSMUST00000117655 780 ntBASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 Gm5812-201ENSMUST00000061073 957 ntBASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb1Q91XX8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb1Q91XX8 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.85■■□□□ 1.25
Pcdhgb1Q91XX8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Pcdhgb1Q91XX8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb1Q91XX8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb1Q91XX8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcdhgb1Q91XX8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb1Q91XX8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgb1Q91XX8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgb1Q91XX8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.83■■□□□ 1.25
Pcdhgb1Q91XX8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgb1Q91XX8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgb1Q91XX8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgb1Q91XX8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdhgb1Q91XX8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdhgb1Q91XX8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb1Q91XX8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb1Q91XX8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb1Q91XX8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb1Q91XX8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.81■■□□□ 1.24
Pcdhgb1Q91XX8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb1Q91XX8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb1Q91XX8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb1Q91XX8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb1Q91XX8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.8■■□□□ 1.24
Pcdhgb1Q91XX8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgb1Q91XX8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms