Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.82■■□□□ 1.24
Trim60Q8VI40 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.81■■□□□ 1.24
Trim60Q8VI40 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim60Q8VI40 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.81■■□□□ 1.24
Trim60Q8VI40 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.81■■□□□ 1.24
Trim60Q8VI40 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trim60Q8VI40 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.8■■□□□ 1.24
Trim60Q8VI40 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim60Q8VI40 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.8■■□□□ 1.24
Trim60Q8VI40 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Trim60Q8VI40 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim60Q8VI40 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim60Q8VI40 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim60Q8VI40 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim60Q8VI40 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Trim60Q8VI40 Gm7432-201ENSMUST00000210343 879 ntBASIC22.79■■□□□ 1.24
Trim60Q8VI40 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim60Q8VI40 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim60Q8VI40 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Trim60Q8VI40 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim60Q8VI40 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.78■■□□□ 1.24
Trim60Q8VI40 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Trim60Q8VI40 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trim60Q8VI40 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Trim60Q8VI40 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trim60Q8VI40 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.77■■□□□ 1.24
Trim60Q8VI40 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Trim60Q8VI40 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
Trim60Q8VI40 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.77■■□□□ 1.24
Trim60Q8VI40 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trim60Q8VI40 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.77■■□□□ 1.24
Trim60Q8VI40 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trim60Q8VI40 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Trim60Q8VI40 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim60Q8VI40 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Trim60Q8VI40 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Trim60Q8VI40 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trim60Q8VI40 Terc-201ENSMUST00000082862 423 ntBASIC22.75■■□□□ 1.23
Trim60Q8VI40 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.75■■□□□ 1.23
Trim60Q8VI40 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim60Q8VI40 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Trim60Q8VI40 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim60Q8VI40 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.74■■□□□ 1.23
Trim60Q8VI40 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim60Q8VI40 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Trim60Q8VI40 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim60Q8VI40 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim60Q8VI40 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim60Q8VI40 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim60Q8VI40 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trim60Q8VI40 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Trim60Q8VI40 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Trim60Q8VI40 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trim60Q8VI40 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Trim60Q8VI40 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim60Q8VI40 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.71■■□□□ 1.23
Trim60Q8VI40 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim60Q8VI40 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim60Q8VI40 Gm11599-201ENSMUST00000118720 878 ntBASIC22.71■■□□□ 1.23
Trim60Q8VI40 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim60Q8VI40 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim60Q8VI40 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim60Q8VI40 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trim60Q8VI40 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim60Q8VI40 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Trim60Q8VI40 Gm45364-201ENSMUST00000210883 159 ntBASIC22.7■■□□□ 1.22
Trim60Q8VI40 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.7■■□□□ 1.22
Trim60Q8VI40 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
Trim60Q8VI40 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim60Q8VI40 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Trim60Q8VI40 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim60Q8VI40 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim60Q8VI40 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim60Q8VI40 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
Trim60Q8VI40 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim60Q8VI40 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Trim60Q8VI40 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim60Q8VI40 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.69■■□□□ 1.22
Trim60Q8VI40 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.69■■□□□ 1.22
Trim60Q8VI40 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim60Q8VI40 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.68■■□□□ 1.22
Trim60Q8VI40 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim60Q8VI40 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trim60Q8VI40 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim60Q8VI40 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trim60Q8VI40 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim60Q8VI40 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim60Q8VI40 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim60Q8VI40 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim60Q8VI40 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.67■■□□□ 1.22
Trim60Q8VI40 Gm22567-201ENSMUST00000175542 342 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms