Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.39■□□□□ 0.69
Cspg4Q8VHY0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg4Q8VHY0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg4Q8VHY0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg4Q8VHY0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg4Q8VHY0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg4Q8VHY0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg4Q8VHY0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg4Q8VHY0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Cspg4Q8VHY0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg4Q8VHY0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.36■□□□□ 0.69
Cspg4Q8VHY0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cspg4Q8VHY0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cspg4Q8VHY0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cspg4Q8VHY0 Amer2-203ENSMUST00000225247 2662 ntBASIC19.35■□□□□ 0.69
Cspg4Q8VHY0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.35■□□□□ 0.69
Cspg4Q8VHY0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.35■□□□□ 0.69
Cspg4Q8VHY0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cspg4Q8VHY0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.35■□□□□ 0.69
Cspg4Q8VHY0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cspg4Q8VHY0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.35■□□□□ 0.69
Cspg4Q8VHY0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cspg4Q8VHY0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cspg4Q8VHY0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cspg4Q8VHY0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cspg4Q8VHY0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cspg4Q8VHY0 Gm8495-201ENSMUST00000188740 694 ntBASIC19.33■□□□□ 0.68
Cspg4Q8VHY0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg4Q8VHY0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cspg4Q8VHY0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.31■□□□□ 0.68
Cspg4Q8VHY0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.31■□□□□ 0.68
Cspg4Q8VHY0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg4Q8VHY0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg4Q8VHY0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg4Q8VHY0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg4Q8VHY0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg4Q8VHY0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cspg4Q8VHY0 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.3■□□□□ 0.68
Cspg4Q8VHY0 Gm7417-201ENSMUST00000192950 473 ntBASIC19.3■□□□□ 0.68
Cspg4Q8VHY0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cspg4Q8VHY0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cspg4Q8VHY0 Gm12922-201ENSMUST00000120626 809 ntBASIC19.3■□□□□ 0.68
Cspg4Q8VHY0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.3■□□□□ 0.68
Cspg4Q8VHY0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cspg4Q8VHY0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg4Q8VHY0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cspg4Q8VHY0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg4Q8VHY0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cspg4Q8VHY0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.29■□□□□ 0.68
Cspg4Q8VHY0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.29■□□□□ 0.68
Cspg4Q8VHY0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cspg4Q8VHY0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg4Q8VHY0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.27■□□□□ 0.68
Cspg4Q8VHY0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg4Q8VHY0 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.27■□□□□ 0.68
Cspg4Q8VHY0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cspg4Q8VHY0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Cspg4Q8VHY0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cspg4Q8VHY0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg4Q8VHY0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg4Q8VHY0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.26■□□□□ 0.67
Cspg4Q8VHY0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg4Q8VHY0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg4Q8VHY0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg4Q8VHY0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cspg4Q8VHY0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg4Q8VHY0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg4Q8VHY0 Gm27454-201ENSMUST00000185090 204 ntBASIC19.25■□□□□ 0.67
Cspg4Q8VHY0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cspg4Q8VHY0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Gm12821-201ENSMUST00000120022 600 ntBASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Cspg4Q8VHY0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cspg4Q8VHY0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.23■□□□□ 0.67
Cspg4Q8VHY0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cspg4Q8VHY0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cspg4Q8VHY0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms