Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdt1Q8R4E9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdt1Q8R4E9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdt1Q8R4E9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdt1Q8R4E9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.32■■□□□ 1
Cdt1Q8R4E9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.32■■□□□ 1
Cdt1Q8R4E9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdt1Q8R4E9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.32■■□□□ 1
Cdt1Q8R4E9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdt1Q8R4E9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdt1Q8R4E9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdt1Q8R4E9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cdt1Q8R4E9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.3■■□□□ 1
Cdt1Q8R4E9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cdt1Q8R4E9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Cdt1Q8R4E9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdt1Q8R4E9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdt1Q8R4E9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cdt1Q8R4E9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.29■■□□□ 1
Cdt1Q8R4E9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdt1Q8R4E9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdt1Q8R4E9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdt1Q8R4E9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdt1Q8R4E9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdt1Q8R4E9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cdt1Q8R4E9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdt1Q8R4E9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdt1Q8R4E9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdt1Q8R4E9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cdt1Q8R4E9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cdt1Q8R4E9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.26■□□□□ 0.99
Cdt1Q8R4E9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cdt1Q8R4E9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdt1Q8R4E9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdt1Q8R4E9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdt1Q8R4E9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdt1Q8R4E9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdt1Q8R4E9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdt1Q8R4E9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.25■□□□□ 0.99
Cdt1Q8R4E9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cdt1Q8R4E9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdt1Q8R4E9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdt1Q8R4E9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdt1Q8R4E9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Cdt1Q8R4E9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdt1Q8R4E9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdt1Q8R4E9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdt1Q8R4E9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.24■□□□□ 0.99
Cdt1Q8R4E9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdt1Q8R4E9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cdt1Q8R4E9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdt1Q8R4E9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdt1Q8R4E9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Cdt1Q8R4E9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdt1Q8R4E9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdt1Q8R4E9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdt1Q8R4E9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.22■□□□□ 0.99
Cdt1Q8R4E9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdt1Q8R4E9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdt1Q8R4E9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdt1Q8R4E9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdt1Q8R4E9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cdt1Q8R4E9 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.21■□□□□ 0.99
Cdt1Q8R4E9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.21■□□□□ 0.99
Cdt1Q8R4E9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Cdt1Q8R4E9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdt1Q8R4E9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdt1Q8R4E9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdt1Q8R4E9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdt1Q8R4E9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdt1Q8R4E9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdt1Q8R4E9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Cdt1Q8R4E9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cdt1Q8R4E9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.18■□□□□ 0.98
Cdt1Q8R4E9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdt1Q8R4E9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdt1Q8R4E9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdt1Q8R4E9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.17■□□□□ 0.98
Cdt1Q8R4E9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cdt1Q8R4E9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.17■□□□□ 0.98
Cdt1Q8R4E9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cdt1Q8R4E9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdt1Q8R4E9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdt1Q8R4E9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdt1Q8R4E9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdt1Q8R4E9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdt1Q8R4E9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdt1Q8R4E9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Cdt1Q8R4E9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdt1Q8R4E9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdt1Q8R4E9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Cdt1Q8R4E9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms