Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.85■□□□□ 0.93
Ubqln1Q8R317 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubqln1Q8R317 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubqln1Q8R317 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ubqln1Q8R317 Gm11175-201ENSMUST00000116172 543 ntBASIC20.84■□□□□ 0.93
Ubqln1Q8R317 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.84■□□□□ 0.93
Ubqln1Q8R317 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubqln1Q8R317 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ubqln1Q8R317 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubqln1Q8R317 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubqln1Q8R317 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Ubqln1Q8R317 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubqln1Q8R317 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.82■□□□□ 0.92
Ubqln1Q8R317 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubqln1Q8R317 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.82■□□□□ 0.92
Ubqln1Q8R317 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubqln1Q8R317 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubqln1Q8R317 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.82■□□□□ 0.92
Ubqln1Q8R317 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ubqln1Q8R317 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ubqln1Q8R317 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubqln1Q8R317 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ubqln1Q8R317 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubqln1Q8R317 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ubqln1Q8R317 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubqln1Q8R317 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubqln1Q8R317 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubqln1Q8R317 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubqln1Q8R317 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ubqln1Q8R317 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ubqln1Q8R317 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubqln1Q8R317 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ubqln1Q8R317 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ubqln1Q8R317 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubqln1Q8R317 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Ubqln1Q8R317 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ubqln1Q8R317 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubqln1Q8R317 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ubqln1Q8R317 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Ubqln1Q8R317 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.78■□□□□ 0.92
Ubqln1Q8R317 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
Ubqln1Q8R317 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ubqln1Q8R317 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.77■□□□□ 0.92
Ubqln1Q8R317 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubqln1Q8R317 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Ubqln1Q8R317 Mir6538-201ENSMUST00000183713 110 ntBASIC20.76■□□□□ 0.91
Ubqln1Q8R317 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ubqln1Q8R317 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubqln1Q8R317 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.76■□□□□ 0.91
Ubqln1Q8R317 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubqln1Q8R317 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubqln1Q8R317 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubqln1Q8R317 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubqln1Q8R317 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.75■□□□□ 0.91
Ubqln1Q8R317 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubqln1Q8R317 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubqln1Q8R317 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubqln1Q8R317 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubqln1Q8R317 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ubqln1Q8R317 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubqln1Q8R317 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubqln1Q8R317 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubqln1Q8R317 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubqln1Q8R317 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubqln1Q8R317 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubqln1Q8R317 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.72■□□□□ 0.91
Ubqln1Q8R317 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubqln1Q8R317 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubqln1Q8R317 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubqln1Q8R317 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubqln1Q8R317 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubqln1Q8R317 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.72■□□□□ 0.91
Ubqln1Q8R317 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubqln1Q8R317 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubqln1Q8R317 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubqln1Q8R317 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubqln1Q8R317 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubqln1Q8R317 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubqln1Q8R317 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.71■□□□□ 0.91
Ubqln1Q8R317 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.71■□□□□ 0.91
Ubqln1Q8R317 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubqln1Q8R317 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ubqln1Q8R317 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubqln1Q8R317 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Ubqln1Q8R317 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubqln1Q8R317 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubqln1Q8R317 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubqln1Q8R317 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ubqln1Q8R317 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ubqln1Q8R317 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubqln1Q8R317 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubqln1Q8R317 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubqln1Q8R317 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ubqln1Q8R317 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ubqln1Q8R317 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.68■□□□□ 0.9
Ubqln1Q8R317 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubqln1Q8R317 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ubqln1Q8R317 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ubqln1Q8R317 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubqln1Q8R317 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms