Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Foxe1Q8R2I0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Foxe1Q8R2I0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Foxe1Q8R2I0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Foxe1Q8R2I0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.32■■□□□ 1.32
Foxe1Q8R2I0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.32■■□□□ 1.32
Foxe1Q8R2I0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
Foxe1Q8R2I0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Foxe1Q8R2I0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Foxe1Q8R2I0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Foxe1Q8R2I0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Foxe1Q8R2I0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
Foxe1Q8R2I0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Foxe1Q8R2I0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Foxe1Q8R2I0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Foxe1Q8R2I0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.3■■□□□ 1.32
Foxe1Q8R2I0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Foxe1Q8R2I0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Foxe1Q8R2I0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.29■■□□□ 1.32
Foxe1Q8R2I0 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.29■■□□□ 1.32
Foxe1Q8R2I0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.29■■□□□ 1.32
Foxe1Q8R2I0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.29■■□□□ 1.32
Foxe1Q8R2I0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Foxe1Q8R2I0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Foxe1Q8R2I0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Foxe1Q8R2I0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Foxe1Q8R2I0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.28■■□□□ 1.32
Foxe1Q8R2I0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Foxe1Q8R2I0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Foxe1Q8R2I0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Foxe1Q8R2I0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Foxe1Q8R2I0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Foxe1Q8R2I0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Foxe1Q8R2I0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.26■■□□□ 1.31
Foxe1Q8R2I0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Foxe1Q8R2I0 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.25■■□□□ 1.31
Foxe1Q8R2I0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Foxe1Q8R2I0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Foxe1Q8R2I0 Gm22238-201ENSMUST00000175222 88 ntBASIC23.24■■□□□ 1.31
Foxe1Q8R2I0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Foxe1Q8R2I0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Foxe1Q8R2I0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxe1Q8R2I0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Foxe1Q8R2I0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.23■■□□□ 1.31
Foxe1Q8R2I0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.23■■□□□ 1.31
Foxe1Q8R2I0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.23■■□□□ 1.31
Foxe1Q8R2I0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Foxe1Q8R2I0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Foxe1Q8R2I0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxe1Q8R2I0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.22■■□□□ 1.31
Foxe1Q8R2I0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Foxe1Q8R2I0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Foxe1Q8R2I0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Foxe1Q8R2I0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Foxe1Q8R2I0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Foxe1Q8R2I0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Foxe1Q8R2I0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxe1Q8R2I0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxe1Q8R2I0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxe1Q8R2I0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Foxe1Q8R2I0 Gm12821-201ENSMUST00000120022 600 ntBASIC23.19■■□□□ 1.3
Foxe1Q8R2I0 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.19■■□□□ 1.3
Foxe1Q8R2I0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxe1Q8R2I0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxe1Q8R2I0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxe1Q8R2I0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.17■■□□□ 1.3
Foxe1Q8R2I0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Gm12922-201ENSMUST00000120626 809 ntBASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxe1Q8R2I0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxe1Q8R2I0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Foxe1Q8R2I0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxe1Q8R2I0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Foxe1Q8R2I0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.14■■□□□ 1.3
Foxe1Q8R2I0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Foxe1Q8R2I0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Foxe1Q8R2I0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Foxe1Q8R2I0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Foxe1Q8R2I0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Foxe1Q8R2I0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.12■■□□□ 1.29
Foxe1Q8R2I0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Foxe1Q8R2I0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.12■■□□□ 1.29
Foxe1Q8R2I0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxe1Q8R2I0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxe1Q8R2I0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms