Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrtm1Q8K377 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrrtm1Q8K377 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrrtm1Q8K377 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.84■□□□□ 0.61
Lrrtm1Q8K377 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrrtm1Q8K377 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrrtm1Q8K377 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrtm1Q8K377 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrtm1Q8K377 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrtm1Q8K377 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.82■□□□□ 0.6
Lrrtm1Q8K377 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.82■□□□□ 0.6
Lrrtm1Q8K377 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrtm1Q8K377 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrtm1Q8K377 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrtm1Q8K377 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lrrtm1Q8K377 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrtm1Q8K377 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrtm1Q8K377 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lrrtm1Q8K377 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrtm1Q8K377 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrtm1Q8K377 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lrrtm1Q8K377 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.8■□□□□ 0.6
Lrrtm1Q8K377 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrtm1Q8K377 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrtm1Q8K377 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrtm1Q8K377 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrtm1Q8K377 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrtm1Q8K377 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrtm1Q8K377 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.79■□□□□ 0.6
Lrrtm1Q8K377 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrtm1Q8K377 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Lrrtm1Q8K377 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrtm1Q8K377 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrtm1Q8K377 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lrrtm1Q8K377 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrtm1Q8K377 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrtm1Q8K377 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrtm1Q8K377 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrtm1Q8K377 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrtm1Q8K377 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.77■□□□□ 0.6
Lrrtm1Q8K377 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrtm1Q8K377 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.77■□□□□ 0.6
Lrrtm1Q8K377 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrtm1Q8K377 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrtm1Q8K377 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrtm1Q8K377 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lrrtm1Q8K377 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Lrrtm1Q8K377 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrtm1Q8K377 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.76■□□□□ 0.59
Lrrtm1Q8K377 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.76■□□□□ 0.59
Lrrtm1Q8K377 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrtm1Q8K377 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrtm1Q8K377 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrtm1Q8K377 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrtm1Q8K377 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrtm1Q8K377 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lrrtm1Q8K377 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.75■□□□□ 0.59
Lrrtm1Q8K377 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrtm1Q8K377 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.75■□□□□ 0.59
Lrrtm1Q8K377 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrtm1Q8K377 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrtm1Q8K377 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.74■□□□□ 0.59
Lrrtm1Q8K377 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrtm1Q8K377 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lrrtm1Q8K377 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrtm1Q8K377 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.74■□□□□ 0.59
Lrrtm1Q8K377 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrtm1Q8K377 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrtm1Q8K377 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrtm1Q8K377 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lrrtm1Q8K377 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrtm1Q8K377 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.72■□□□□ 0.59
Lrrtm1Q8K377 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrtm1Q8K377 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrtm1Q8K377 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lrrtm1Q8K377 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrtm1Q8K377 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lrrtm1Q8K377 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.71■□□□□ 0.59
Lrrtm1Q8K377 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrtm1Q8K377 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lrrtm1Q8K377 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrtm1Q8K377 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms