Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
Depdc1aQ8CIG0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.26■■□□□ 1.63
Depdc1aQ8CIG0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.26■■□□□ 1.63
Depdc1aQ8CIG0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Depdc1aQ8CIG0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Depdc1aQ8CIG0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1aQ8CIG0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1aQ8CIG0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1aQ8CIG0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1aQ8CIG0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1aQ8CIG0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1aQ8CIG0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1aQ8CIG0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Depdc1aQ8CIG0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Depdc1aQ8CIG0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Depdc1aQ8CIG0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Depdc1aQ8CIG0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.22■■□□□ 1.63
Depdc1aQ8CIG0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Depdc1aQ8CIG0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25.22■■□□□ 1.63
Depdc1aQ8CIG0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Depdc1aQ8CIG0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Depdc1aQ8CIG0 Gm13238-201ENSMUST00000117655 780 ntBASIC25.21■■□□□ 1.63
Depdc1aQ8CIG0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Depdc1aQ8CIG0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.21■■□□□ 1.63
Depdc1aQ8CIG0 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.21■■□□□ 1.63
Depdc1aQ8CIG0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Depdc1aQ8CIG0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
Depdc1aQ8CIG0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.2■■□□□ 1.62
Depdc1aQ8CIG0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Depdc1aQ8CIG0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Depdc1aQ8CIG0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Depdc1aQ8CIG0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1aQ8CIG0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1aQ8CIG0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Depdc1aQ8CIG0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Depdc1aQ8CIG0 Gm5812-201ENSMUST00000061073 957 ntBASIC25.18■■□□□ 1.62
Depdc1aQ8CIG0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1aQ8CIG0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.17■■□□□ 1.62
Depdc1aQ8CIG0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1aQ8CIG0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1aQ8CIG0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1aQ8CIG0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Depdc1aQ8CIG0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 Gm45444-201ENSMUST00000211394 898 ntBASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.15■■□□□ 1.62
Depdc1aQ8CIG0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Depdc1aQ8CIG0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Depdc1aQ8CIG0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Depdc1aQ8CIG0 Gm43566-201ENSMUST00000196851 808 ntBASIC25.13■■□□□ 1.61
Depdc1aQ8CIG0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Depdc1aQ8CIG0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Depdc1aQ8CIG0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Depdc1aQ8CIG0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1aQ8CIG0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1aQ8CIG0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Depdc1aQ8CIG0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1aQ8CIG0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1aQ8CIG0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Depdc1aQ8CIG0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Depdc1aQ8CIG0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Depdc1aQ8CIG0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.11■■□□□ 1.61
Depdc1aQ8CIG0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Depdc1aQ8CIG0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.1■■□□□ 1.61
Depdc1aQ8CIG0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Depdc1aQ8CIG0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Depdc1aQ8CIG0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Depdc1aQ8CIG0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
Depdc1aQ8CIG0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Depdc1aQ8CIG0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Depdc1aQ8CIG0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Depdc1aQ8CIG0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Depdc1aQ8CIG0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Depdc1aQ8CIG0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Depdc1aQ8CIG0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Depdc1aQ8CIG0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Depdc1aQ8CIG0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Depdc1aQ8CIG0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Depdc1aQ8CIG0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.06■■□□□ 1.6
Depdc1aQ8CIG0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Depdc1aQ8CIG0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Depdc1aQ8CIG0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Depdc1aQ8CIG0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.05■■□□□ 1.6
Depdc1aQ8CIG0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Depdc1aQ8CIG0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Depdc1aQ8CIG0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms