Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.84■□□□□ 0.77
Lysmd4Q8CC84 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lysmd4Q8CC84 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.84■□□□□ 0.77
Lysmd4Q8CC84 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lysmd4Q8CC84 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd4Q8CC84 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd4Q8CC84 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lysmd4Q8CC84 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.82■□□□□ 0.76
Lysmd4Q8CC84 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd4Q8CC84 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd4Q8CC84 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd4Q8CC84 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.81■□□□□ 0.76
Lysmd4Q8CC84 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd4Q8CC84 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Lysmd4Q8CC84 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd4Q8CC84 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd4Q8CC84 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Lysmd4Q8CC84 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lysmd4Q8CC84 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.8■□□□□ 0.76
Lysmd4Q8CC84 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lysmd4Q8CC84 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Lysmd4Q8CC84 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lysmd4Q8CC84 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd4Q8CC84 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Lysmd4Q8CC84 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.79■□□□□ 0.76
Lysmd4Q8CC84 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.79■□□□□ 0.76
Lysmd4Q8CC84 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd4Q8CC84 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.78■□□□□ 0.76
Lysmd4Q8CC84 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd4Q8CC84 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd4Q8CC84 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd4Q8CC84 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd4Q8CC84 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd4Q8CC84 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd4Q8CC84 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd4Q8CC84 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd4Q8CC84 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd4Q8CC84 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd4Q8CC84 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Lysmd4Q8CC84 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Lysmd4Q8CC84 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd4Q8CC84 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd4Q8CC84 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd4Q8CC84 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lysmd4Q8CC84 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd4Q8CC84 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd4Q8CC84 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lysmd4Q8CC84 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lysmd4Q8CC84 Gm22567-201ENSMUST00000175542 342 ntBASIC19.73■□□□□ 0.75
Lysmd4Q8CC84 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.73■□□□□ 0.75
Lysmd4Q8CC84 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lysmd4Q8CC84 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.73■□□□□ 0.75
Lysmd4Q8CC84 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lysmd4Q8CC84 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lysmd4Q8CC84 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Lysmd4Q8CC84 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lysmd4Q8CC84 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lysmd4Q8CC84 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.72■□□□□ 0.75
Lysmd4Q8CC84 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lysmd4Q8CC84 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lysmd4Q8CC84 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd4Q8CC84 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd4Q8CC84 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.7■□□□□ 0.74
Lysmd4Q8CC84 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms