Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap54Q8C6S9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap54Q8C6S9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap54Q8C6S9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap54Q8C6S9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.74■■□□□ 1.07
Cfap54Q8C6S9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap54Q8C6S9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cfap54Q8C6S9 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.74■■□□□ 1.07
Cfap54Q8C6S9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Cfap54Q8C6S9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.73■■□□□ 1.07
Cfap54Q8C6S9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap54Q8C6S9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.73■■□□□ 1.07
Cfap54Q8C6S9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cfap54Q8C6S9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cfap54Q8C6S9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cfap54Q8C6S9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cfap54Q8C6S9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Cfap54Q8C6S9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cfap54Q8C6S9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cfap54Q8C6S9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.71■■□□□ 1.07
Cfap54Q8C6S9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap54Q8C6S9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Cfap54Q8C6S9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cfap54Q8C6S9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.71■■□□□ 1.07
Cfap54Q8C6S9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap54Q8C6S9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Cfap54Q8C6S9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Cfap54Q8C6S9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cfap54Q8C6S9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.69■■□□□ 1.06
Cfap54Q8C6S9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap54Q8C6S9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap54Q8C6S9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap54Q8C6S9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cfap54Q8C6S9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cfap54Q8C6S9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.68■■□□□ 1.06
Cfap54Q8C6S9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cfap54Q8C6S9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cfap54Q8C6S9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cfap54Q8C6S9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cfap54Q8C6S9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cfap54Q8C6S9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cfap54Q8C6S9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.65■■□□□ 1.06
Cfap54Q8C6S9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Cfap54Q8C6S9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cfap54Q8C6S9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cfap54Q8C6S9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cfap54Q8C6S9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cfap54Q8C6S9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.64■■□□□ 1.05
Cfap54Q8C6S9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cfap54Q8C6S9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cfap54Q8C6S9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cfap54Q8C6S9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cfap54Q8C6S9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Cfap54Q8C6S9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cfap54Q8C6S9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.62■■□□□ 1.05
Cfap54Q8C6S9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cfap54Q8C6S9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cfap54Q8C6S9 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.61■■□□□ 1.05
Cfap54Q8C6S9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cfap54Q8C6S9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.6■■□□□ 1.05
Cfap54Q8C6S9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.59■■□□□ 1.05
Cfap54Q8C6S9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cfap54Q8C6S9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Cfap54Q8C6S9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.58■■□□□ 1.05
Cfap54Q8C6S9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap54Q8C6S9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap54Q8C6S9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cfap54Q8C6S9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.57■■□□□ 1.04
Cfap54Q8C6S9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap54Q8C6S9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap54Q8C6S9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap54Q8C6S9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.57■■□□□ 1.04
Cfap54Q8C6S9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cfap54Q8C6S9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap54Q8C6S9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.56■■□□□ 1.04
Cfap54Q8C6S9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap54Q8C6S9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap54Q8C6S9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms