Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc187Q8C5V8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc187Q8C5V8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Ccdc187Q8C5V8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ccdc187Q8C5V8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc187Q8C5V8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc187Q8C5V8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.44■■□□□ 1.18
Ccdc187Q8C5V8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ccdc187Q8C5V8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc187Q8C5V8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc187Q8C5V8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ccdc187Q8C5V8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc187Q8C5V8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc187Q8C5V8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc187Q8C5V8 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.42■■□□□ 1.18
Ccdc187Q8C5V8 Rps24-207ENSMUST00000224568 714 ntBASIC22.42■■□□□ 1.18
Ccdc187Q8C5V8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ccdc187Q8C5V8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ccdc187Q8C5V8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc187Q8C5V8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc187Q8C5V8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc187Q8C5V8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ccdc187Q8C5V8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc187Q8C5V8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc187Q8C5V8 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.4■■□□□ 1.18
Ccdc187Q8C5V8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ccdc187Q8C5V8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Ccdc187Q8C5V8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.18
Ccdc187Q8C5V8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ccdc187Q8C5V8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 Gm45102-201ENSMUST00000207427 857 ntBASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ccdc187Q8C5V8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc187Q8C5V8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Ccdc187Q8C5V8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Ccdc187Q8C5V8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.38■■□□□ 1.17
Ccdc187Q8C5V8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ccdc187Q8C5V8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc187Q8C5V8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc187Q8C5V8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ccdc187Q8C5V8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Ccdc187Q8C5V8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc187Q8C5V8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ccdc187Q8C5V8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ccdc187Q8C5V8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ccdc187Q8C5V8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.36■■□□□ 1.17
Ccdc187Q8C5V8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ccdc187Q8C5V8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.36■■□□□ 1.17
Ccdc187Q8C5V8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.35■■□□□ 1.17
Ccdc187Q8C5V8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
Ccdc187Q8C5V8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.35■■□□□ 1.17
Ccdc187Q8C5V8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ccdc187Q8C5V8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ccdc187Q8C5V8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ccdc187Q8C5V8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ccdc187Q8C5V8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ccdc187Q8C5V8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ccdc187Q8C5V8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.34■■□□□ 1.17
Ccdc187Q8C5V8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ccdc187Q8C5V8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc187Q8C5V8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc187Q8C5V8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc187Q8C5V8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ccdc187Q8C5V8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
Ccdc187Q8C5V8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ccdc187Q8C5V8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ccdc187Q8C5V8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ccdc187Q8C5V8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ccdc187Q8C5V8 Gm14117-201ENSMUST00000122417 843 ntBASIC22.32■■□□□ 1.16
Ccdc187Q8C5V8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ccdc187Q8C5V8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ccdc187Q8C5V8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.3■■□□□ 1.16
Ccdc187Q8C5V8 Gm9959-201ENSMUST00000068277 390 ntBASIC22.3■■□□□ 1.16
Ccdc187Q8C5V8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ccdc187Q8C5V8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc187Q8C5V8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.29■■□□□ 1.16
Ccdc187Q8C5V8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Ccdc187Q8C5V8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.29■■□□□ 1.16
Ccdc187Q8C5V8 Gm10232-201ENSMUST00000089221 720 ntBASIC22.29■■□□□ 1.16
Ccdc187Q8C5V8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Ccdc187Q8C5V8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc187Q8C5V8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
Ccdc187Q8C5V8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.28■■□□□ 1.16
Ccdc187Q8C5V8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Ccdc187Q8C5V8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms