Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.77■■■□□ 2.52
Cwc22Q8C5N3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Cwc22Q8C5N3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
Cwc22Q8C5N3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Cwc22Q8C5N3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Cwc22Q8C5N3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cwc22Q8C5N3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cwc22Q8C5N3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cwc22Q8C5N3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Cwc22Q8C5N3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cwc22Q8C5N3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC30.74■■■□□ 2.51
Cwc22Q8C5N3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cwc22Q8C5N3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Cwc22Q8C5N3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Cwc22Q8C5N3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC30.72■■■□□ 2.51
Cwc22Q8C5N3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cwc22Q8C5N3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cwc22Q8C5N3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Cwc22Q8C5N3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cwc22Q8C5N3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Cwc22Q8C5N3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.71■■■□□ 2.51
Cwc22Q8C5N3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cwc22Q8C5N3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC30.71■■■□□ 2.51
Cwc22Q8C5N3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cwc22Q8C5N3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cwc22Q8C5N3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
Cwc22Q8C5N3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cwc22Q8C5N3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cwc22Q8C5N3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cwc22Q8C5N3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cwc22Q8C5N3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Cwc22Q8C5N3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cwc22Q8C5N3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cwc22Q8C5N3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
Cwc22Q8C5N3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cwc22Q8C5N3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cwc22Q8C5N3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cwc22Q8C5N3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cwc22Q8C5N3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cwc22Q8C5N3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cwc22Q8C5N3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.65■■■□□ 2.5
Cwc22Q8C5N3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.65■■■□□ 2.5
Cwc22Q8C5N3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cwc22Q8C5N3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC30.64■■■□□ 2.5
Cwc22Q8C5N3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cwc22Q8C5N3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cwc22Q8C5N3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Cwc22Q8C5N3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cwc22Q8C5N3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC30.63■■■□□ 2.49
Cwc22Q8C5N3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Cwc22Q8C5N3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cwc22Q8C5N3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cwc22Q8C5N3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
Cwc22Q8C5N3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cwc22Q8C5N3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cwc22Q8C5N3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
Cwc22Q8C5N3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Cwc22Q8C5N3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
Cwc22Q8C5N3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cwc22Q8C5N3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
Cwc22Q8C5N3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cwc22Q8C5N3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cwc22Q8C5N3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Cwc22Q8C5N3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Cwc22Q8C5N3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cwc22Q8C5N3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cwc22Q8C5N3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC30.58■■■□□ 2.49
Cwc22Q8C5N3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cwc22Q8C5N3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cwc22Q8C5N3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cwc22Q8C5N3 Gm10420-201ENSMUST00000121713 882 ntBASIC30.56■■■□□ 2.48
Cwc22Q8C5N3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Cwc22Q8C5N3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cwc22Q8C5N3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.55■■■□□ 2.48
Cwc22Q8C5N3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC30.55■■■□□ 2.48
Cwc22Q8C5N3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Cwc22Q8C5N3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Cwc22Q8C5N3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cwc22Q8C5N3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cwc22Q8C5N3 Gm22567-201ENSMUST00000175542 342 ntBASIC30.54■■■□□ 2.48
Cwc22Q8C5N3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cwc22Q8C5N3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cwc22Q8C5N3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC30.54■■■□□ 2.48
Cwc22Q8C5N3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC30.53■■■□□ 2.48
Cwc22Q8C5N3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Cwc22Q8C5N3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cwc22Q8C5N3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Cwc22Q8C5N3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Cwc22Q8C5N3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Cwc22Q8C5N3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Cwc22Q8C5N3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
Cwc22Q8C5N3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms