Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Fam43aQ8BUP8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Fam43aQ8BUP8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
Fam43aQ8BUP8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Fam43aQ8BUP8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Fam43aQ8BUP8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Fam43aQ8BUP8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Fam43aQ8BUP8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam43aQ8BUP8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Fam43aQ8BUP8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Fam43aQ8BUP8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Fam43aQ8BUP8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Fam43aQ8BUP8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Fam43aQ8BUP8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Fam43aQ8BUP8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Fam43aQ8BUP8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Fam43aQ8BUP8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Fam43aQ8BUP8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Fam43aQ8BUP8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Fam43aQ8BUP8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Fam43aQ8BUP8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Fam43aQ8BUP8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Fam43aQ8BUP8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Fam43aQ8BUP8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 Gm10616-201ENSMUST00000205285 2127 ntBASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Fam43aQ8BUP8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Fam43aQ8BUP8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Fam43aQ8BUP8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Fam43aQ8BUP8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Fam43aQ8BUP8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Fam43aQ8BUP8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.22■■□□□ 1.47
Fam43aQ8BUP8 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.22■■□□□ 1.47
Fam43aQ8BUP8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Fam43aQ8BUP8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Fam43aQ8BUP8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Fam43aQ8BUP8 Iqck-206ENSMUST00000208658 2891 ntBASIC24.21■■□□□ 1.47
Fam43aQ8BUP8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Fam43aQ8BUP8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.21■■□□□ 1.47
Fam43aQ8BUP8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Fam43aQ8BUP8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Fam43aQ8BUP8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Fam43aQ8BUP8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Fam43aQ8BUP8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Fam43aQ8BUP8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.19■■□□□ 1.46
Fam43aQ8BUP8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Fam43aQ8BUP8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Fam43aQ8BUP8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Fam43aQ8BUP8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Fam43aQ8BUP8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Fam43aQ8BUP8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
Fam43aQ8BUP8 Gm4799-201ENSMUST00000095396 657 ntBASIC24.18■■□□□ 1.46
Fam43aQ8BUP8 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.17■■□□□ 1.46
Fam43aQ8BUP8 Gm43182-201ENSMUST00000199476 2528 ntBASIC24.17■■□□□ 1.46
Fam43aQ8BUP8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Fam43aQ8BUP8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Fam43aQ8BUP8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.17■■□□□ 1.46
Fam43aQ8BUP8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Fam43aQ8BUP8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Fam43aQ8BUP8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Fam43aQ8BUP8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Fam43aQ8BUP8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Fam43aQ8BUP8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Fam43aQ8BUP8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Fam43aQ8BUP8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Fam43aQ8BUP8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Fam43aQ8BUP8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Fam43aQ8BUP8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Fam43aQ8BUP8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Fam43aQ8BUP8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Fam43aQ8BUP8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.14■■□□□ 1.45
Fam43aQ8BUP8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.14■■□□□ 1.45
Fam43aQ8BUP8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Fam43aQ8BUP8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Fam43aQ8BUP8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Fam43aQ8BUP8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Fam43aQ8BUP8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Fam43aQ8BUP8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Fam43aQ8BUP8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Fam43aQ8BUP8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Fam43aQ8BUP8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
Fam43aQ8BUP8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.12■■□□□ 1.45
Fam43aQ8BUP8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Fam43aQ8BUP8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Fam43aQ8BUP8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
Fam43aQ8BUP8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Fam43aQ8BUP8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Fam43aQ8BUP8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Fam43aQ8BUP8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Fam43aQ8BUP8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Fam43aQ8BUP8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.1■■□□□ 1.45
Fam43aQ8BUP8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Fam43aQ8BUP8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.1■■□□□ 1.45
Fam43aQ8BUP8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms