Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne4Q8BLR2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.78■□□□□ 0.76
Cpne4Q8BLR2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne4Q8BLR2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpne4Q8BLR2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpne4Q8BLR2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cpne4Q8BLR2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cpne4Q8BLR2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne4Q8BLR2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne4Q8BLR2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne4Q8BLR2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cpne4Q8BLR2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne4Q8BLR2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne4Q8BLR2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cpne4Q8BLR2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cpne4Q8BLR2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne4Q8BLR2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.75■□□□□ 0.75
Cpne4Q8BLR2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne4Q8BLR2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne4Q8BLR2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne4Q8BLR2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.74■□□□□ 0.75
Cpne4Q8BLR2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne4Q8BLR2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne4Q8BLR2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne4Q8BLR2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne4Q8BLR2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne4Q8BLR2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne4Q8BLR2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne4Q8BLR2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne4Q8BLR2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne4Q8BLR2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne4Q8BLR2 Gm10420-201ENSMUST00000121713 882 ntBASIC19.7■□□□□ 0.74
Cpne4Q8BLR2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.7■□□□□ 0.74
Cpne4Q8BLR2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne4Q8BLR2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpne4Q8BLR2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpne4Q8BLR2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpne4Q8BLR2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne4Q8BLR2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne4Q8BLR2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne4Q8BLR2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne4Q8BLR2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne4Q8BLR2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne4Q8BLR2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cpne4Q8BLR2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cpne4Q8BLR2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.67■□□□□ 0.74
Cpne4Q8BLR2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cpne4Q8BLR2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne4Q8BLR2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne4Q8BLR2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cpne4Q8BLR2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cpne4Q8BLR2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpne4Q8BLR2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne4Q8BLR2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne4Q8BLR2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne4Q8BLR2 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.65■□□□□ 0.74
Cpne4Q8BLR2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpne4Q8BLR2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.64■□□□□ 0.73
Cpne4Q8BLR2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne4Q8BLR2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpne4Q8BLR2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Cpne4Q8BLR2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne4Q8BLR2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpne4Q8BLR2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Cpne4Q8BLR2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpne4Q8BLR2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne4Q8BLR2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.61■□□□□ 0.73
Cpne4Q8BLR2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne4Q8BLR2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cpne4Q8BLR2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne4Q8BLR2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne4Q8BLR2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne4Q8BLR2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.59■□□□□ 0.73
Cpne4Q8BLR2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne4Q8BLR2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cpne4Q8BLR2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms