Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdhr3Q8BL00 Gm8503-201ENSMUST00000118131 455 ntBASIC19.28■□□□□ 0.68
Cdhr3Q8BL00 Gm4799-201ENSMUST00000095396 657 ntBASIC19.28■□□□□ 0.68
Cdhr3Q8BL00 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr3Q8BL00 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr3Q8BL00 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr3Q8BL00 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Cdhr3Q8BL00 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdhr3Q8BL00 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdhr3Q8BL00 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdhr3Q8BL00 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.26■□□□□ 0.67
Cdhr3Q8BL00 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdhr3Q8BL00 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdhr3Q8BL00 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdhr3Q8BL00 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdhr3Q8BL00 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.26■□□□□ 0.67
Cdhr3Q8BL00 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdhr3Q8BL00 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.24■□□□□ 0.67
Cdhr3Q8BL00 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr3Q8BL00 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cdhr3Q8BL00 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.24■□□□□ 0.67
Cdhr3Q8BL00 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr3Q8BL00 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.24■□□□□ 0.67
Cdhr3Q8BL00 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdhr3Q8BL00 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Gm9812-201ENSMUST00000061934 968 ntBASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdhr3Q8BL00 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdhr3Q8BL00 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr3Q8BL00 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr3Q8BL00 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr3Q8BL00 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdhr3Q8BL00 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdhr3Q8BL00 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdhr3Q8BL00 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdhr3Q8BL00 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr3Q8BL00 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr3Q8BL00 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdhr3Q8BL00 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr3Q8BL00 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr3Q8BL00 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdhr3Q8BL00 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdhr3Q8BL00 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdhr3Q8BL00 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdhr3Q8BL00 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.19■□□□□ 0.66
Cdhr3Q8BL00 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.19■□□□□ 0.66
Cdhr3Q8BL00 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdhr3Q8BL00 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdhr3Q8BL00 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cdhr3Q8BL00 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr3Q8BL00 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr3Q8BL00 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.17■□□□□ 0.66
Cdhr3Q8BL00 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdhr3Q8BL00 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.17■□□□□ 0.66
Cdhr3Q8BL00 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdhr3Q8BL00 Mir3960-201ENSMUST00000198213 73 ntBASIC19.16■□□□□ 0.66
Cdhr3Q8BL00 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdhr3Q8BL00 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdhr3Q8BL00 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cdhr3Q8BL00 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdhr3Q8BL00 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms