Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf38Q8BI21 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf38Q8BI21 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.32■■□□□ 1
Rnf38Q8BI21 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf38Q8BI21 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf38Q8BI21 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf38Q8BI21 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf38Q8BI21 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Rnf38Q8BI21 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf38Q8BI21 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf38Q8BI21 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rnf38Q8BI21 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf38Q8BI21 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf38Q8BI21 Gm4799-201ENSMUST00000095396 657 ntBASIC21.3■■□□□ 1
Rnf38Q8BI21 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf38Q8BI21 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf38Q8BI21 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.3■■□□□ 1
Rnf38Q8BI21 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf38Q8BI21 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf38Q8BI21 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf38Q8BI21 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.29■■□□□ 1
Rnf38Q8BI21 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf38Q8BI21 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf38Q8BI21 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf38Q8BI21 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf38Q8BI21 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.28■■□□□ 1
Rnf38Q8BI21 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf38Q8BI21 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf38Q8BI21 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf38Q8BI21 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf38Q8BI21 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf38Q8BI21 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.27■■□□□ 1
Rnf38Q8BI21 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf38Q8BI21 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf38Q8BI21 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf38Q8BI21 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf38Q8BI21 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf38Q8BI21 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf38Q8BI21 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rnf38Q8BI21 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.25■□□□□ 0.99
Rnf38Q8BI21 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Rnf38Q8BI21 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf38Q8BI21 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf38Q8BI21 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Rnf38Q8BI21 Gm11599-201ENSMUST00000118720 878 ntBASIC21.23■□□□□ 0.99
Rnf38Q8BI21 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rnf38Q8BI21 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf38Q8BI21 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf38Q8BI21 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf38Q8BI21 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf38Q8BI21 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Rnf38Q8BI21 Gm9812-201ENSMUST00000061934 968 ntBASIC21.22■□□□□ 0.99
Rnf38Q8BI21 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Rnf38Q8BI21 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf38Q8BI21 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf38Q8BI21 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rnf38Q8BI21 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Rnf38Q8BI21 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf38Q8BI21 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf38Q8BI21 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf38Q8BI21 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
Rnf38Q8BI21 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf38Q8BI21 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf38Q8BI21 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.18■□□□□ 0.98
Rnf38Q8BI21 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rnf38Q8BI21 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf38Q8BI21 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf38Q8BI21 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf38Q8BI21 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf38Q8BI21 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.17■□□□□ 0.98
Rnf38Q8BI21 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.17■□□□□ 0.98
Rnf38Q8BI21 Gm45364-201ENSMUST00000210883 159 ntBASIC21.17■□□□□ 0.98
Rnf38Q8BI21 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rnf38Q8BI21 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.17■□□□□ 0.98
Rnf38Q8BI21 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf38Q8BI21 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.17■□□□□ 0.98
Rnf38Q8BI21 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf38Q8BI21 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf38Q8BI21 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rnf38Q8BI21 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.16■□□□□ 0.98
Rnf38Q8BI21 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.16■□□□□ 0.98
Rnf38Q8BI21 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.16■□□□□ 0.98
Rnf38Q8BI21 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.16■□□□□ 0.98
Rnf38Q8BI21 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf38Q8BI21 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.15■□□□□ 0.98
Rnf38Q8BI21 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.15■□□□□ 0.98
Rnf38Q8BI21 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf38Q8BI21 Mir3960-201ENSMUST00000198213 73 ntBASIC21.15■□□□□ 0.98
Rnf38Q8BI21 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.15■□□□□ 0.98
Rnf38Q8BI21 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf38Q8BI21 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms