Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc28Q80XJ3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc28Q80XJ3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc28Q80XJ3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.02■□□□□ 0.64
Ttc28Q80XJ3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ttc28Q80XJ3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ttc28Q80XJ3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ttc28Q80XJ3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc28Q80XJ3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc28Q80XJ3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc28Q80XJ3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.99■□□□□ 0.63
Ttc28Q80XJ3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc28Q80XJ3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc28Q80XJ3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc28Q80XJ3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.99■□□□□ 0.63
Ttc28Q80XJ3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc28Q80XJ3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc28Q80XJ3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ttc28Q80XJ3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.98■□□□□ 0.63
Ttc28Q80XJ3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc28Q80XJ3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ttc28Q80XJ3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.97■□□□□ 0.63
Ttc28Q80XJ3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.97■□□□□ 0.63
Ttc28Q80XJ3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.97■□□□□ 0.63
Ttc28Q80XJ3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.97■□□□□ 0.63
Ttc28Q80XJ3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc28Q80XJ3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc28Q80XJ3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ttc28Q80XJ3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc28Q80XJ3 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.96■□□□□ 0.63
Ttc28Q80XJ3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ttc28Q80XJ3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ttc28Q80XJ3 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.95■□□□□ 0.62
Ttc28Q80XJ3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Ttc28Q80XJ3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.95■□□□□ 0.62
Ttc28Q80XJ3 Gm7417-201ENSMUST00000192950 473 ntBASIC18.95■□□□□ 0.62
Ttc28Q80XJ3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc28Q80XJ3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc28Q80XJ3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc28Q80XJ3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
Ttc28Q80XJ3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ttc28Q80XJ3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ttc28Q80XJ3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ttc28Q80XJ3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.94■□□□□ 0.62
Ttc28Q80XJ3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ttc28Q80XJ3 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.94■□□□□ 0.62
Ttc28Q80XJ3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc28Q80XJ3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.92■□□□□ 0.62
Ttc28Q80XJ3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc28Q80XJ3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.92■□□□□ 0.62
Ttc28Q80XJ3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 Gm9847-201ENSMUST00000052528 599 ntBASIC18.91■□□□□ 0.62
Ttc28Q80XJ3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc28Q80XJ3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Ttc28Q80XJ3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc28Q80XJ3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc28Q80XJ3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc28Q80XJ3 Gm12922-201ENSMUST00000120626 809 ntBASIC18.9■□□□□ 0.62
Ttc28Q80XJ3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.9■□□□□ 0.62
Ttc28Q80XJ3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc28Q80XJ3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.89■□□□□ 0.61
Ttc28Q80XJ3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc28Q80XJ3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc28Q80XJ3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc28Q80XJ3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.87■□□□□ 0.61
Ttc28Q80XJ3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.87■□□□□ 0.61
Ttc28Q80XJ3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ttc28Q80XJ3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc28Q80XJ3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc28Q80XJ3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ttc28Q80XJ3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms