Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lrrtm4Q80XG9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Lrrtm4Q80XG9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lrrtm4Q80XG9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Lrrtm4Q80XG9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lrrtm4Q80XG9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Lrrtm4Q80XG9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Lrrtm4Q80XG9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.57■■□□□ 1.04
Lrrtm4Q80XG9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lrrtm4Q80XG9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lrrtm4Q80XG9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrtm4Q80XG9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrtm4Q80XG9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrtm4Q80XG9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrtm4Q80XG9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lrrtm4Q80XG9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lrrtm4Q80XG9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lrrtm4Q80XG9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lrrtm4Q80XG9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.54■■□□□ 1.04
Lrrtm4Q80XG9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Lrrtm4Q80XG9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lrrtm4Q80XG9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Lrrtm4Q80XG9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lrrtm4Q80XG9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Lrrtm4Q80XG9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lrrtm4Q80XG9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Lrrtm4Q80XG9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Lrrtm4Q80XG9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lrrtm4Q80XG9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lrrtm4Q80XG9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lrrtm4Q80XG9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lrrtm4Q80XG9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrtm4Q80XG9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Lrrtm4Q80XG9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrtm4Q80XG9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrtm4Q80XG9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrtm4Q80XG9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.51■■□□□ 1.03
Lrrtm4Q80XG9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Lrrtm4Q80XG9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lrrtm4Q80XG9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lrrtm4Q80XG9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lrrtm4Q80XG9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrtm4Q80XG9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Lrrtm4Q80XG9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrtm4Q80XG9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrtm4Q80XG9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrtm4Q80XG9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.49■■□□□ 1.03
Lrrtm4Q80XG9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrtm4Q80XG9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrtm4Q80XG9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.48■■□□□ 1.03
Lrrtm4Q80XG9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.48■■□□□ 1.03
Lrrtm4Q80XG9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrtm4Q80XG9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrtm4Q80XG9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrtm4Q80XG9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrtm4Q80XG9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.48■■□□□ 1.03
Lrrtm4Q80XG9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.47■■□□□ 1.03
Lrrtm4Q80XG9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lrrtm4Q80XG9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lrrtm4Q80XG9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lrrtm4Q80XG9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Lrrtm4Q80XG9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrtm4Q80XG9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm4Q80XG9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrtm4Q80XG9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrtm4Q80XG9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrtm4Q80XG9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrtm4Q80XG9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrtm4Q80XG9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrtm4Q80XG9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrtm4Q80XG9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.43■■□□□ 1.02
Lrrtm4Q80XG9 Gm5921-201ENSMUST00000075898 882 ntBASIC21.43■■□□□ 1.02
Lrrtm4Q80XG9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrtm4Q80XG9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.43■■□□□ 1.02
Lrrtm4Q80XG9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrtm4Q80XG9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrtm4Q80XG9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Lrrtm4Q80XG9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms