Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13bQ80TY5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC13.7□□□□□ -0.22
Vps13bQ80TY5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13bQ80TY5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13bQ80TY5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps13bQ80TY5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13bQ80TY5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps13bQ80TY5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps13bQ80TY5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps13bQ80TY5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Vps13bQ80TY5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Vps13bQ80TY5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13bQ80TY5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.66□□□□□ -0.22
Vps13bQ80TY5 Gm22238-201ENSMUST00000175222 88 ntBASIC13.66□□□□□ -0.22
Vps13bQ80TY5 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.66□□□□□ -0.22
Vps13bQ80TY5 Zxda-201ENSMUST00000117281 2621 ntBASIC13.66□□□□□ -0.22
Vps13bQ80TY5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13bQ80TY5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13bQ80TY5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps13bQ80TY5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13bQ80TY5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC13.65□□□□□ -0.22
Vps13bQ80TY5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps13bQ80TY5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.65□□□□□ -0.22
Vps13bQ80TY5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.65□□□□□ -0.22
Vps13bQ80TY5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13bQ80TY5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13bQ80TY5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13bQ80TY5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13bQ80TY5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Vps13bQ80TY5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vps13bQ80TY5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13bQ80TY5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13bQ80TY5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13bQ80TY5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13bQ80TY5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.62□□□□□ -0.23
Vps13bQ80TY5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13bQ80TY5 AC117769.4-201ENSMUST00000225679 685 ntBASIC13.62□□□□□ -0.23
Vps13bQ80TY5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13bQ80TY5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13bQ80TY5 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.61□□□□□ -0.23
Vps13bQ80TY5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps13bQ80TY5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Vps13bQ80TY5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps13bQ80TY5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13bQ80TY5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13bQ80TY5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13bQ80TY5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13bQ80TY5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC13.59□□□□□ -0.23
Vps13bQ80TY5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps13bQ80TY5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps13bQ80TY5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps13bQ80TY5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.59□□□□□ -0.23
Vps13bQ80TY5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps13bQ80TY5 Gm9847-201ENSMUST00000052528 599 ntBASIC13.59□□□□□ -0.23
Vps13bQ80TY5 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.58□□□□□ -0.24
Vps13bQ80TY5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps13bQ80TY5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps13bQ80TY5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps13bQ80TY5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps13bQ80TY5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps13bQ80TY5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13bQ80TY5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13bQ80TY5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13bQ80TY5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps13bQ80TY5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13bQ80TY5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13bQ80TY5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13bQ80TY5 Gm27454-201ENSMUST00000185090 204 ntBASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Gm12922-201ENSMUST00000120626 809 ntBASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13bQ80TY5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms