Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC26.04■■□□□ 1.76
Scn10aQ6QIY3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC26.04■■□□□ 1.76
Scn10aQ6QIY3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Scn10aQ6QIY3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Scn10aQ6QIY3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Scn10aQ6QIY3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Scn10aQ6QIY3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Scn10aQ6QIY3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.02■■□□□ 1.76
Scn10aQ6QIY3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.02■■□□□ 1.76
Scn10aQ6QIY3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Scn10aQ6QIY3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Scn10aQ6QIY3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Scn10aQ6QIY3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Scn10aQ6QIY3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Scn10aQ6QIY3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Scn10aQ6QIY3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Scn10aQ6QIY3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26■■□□□ 1.75
Scn10aQ6QIY3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Scn10aQ6QIY3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Scn10aQ6QIY3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.98■■□□□ 1.75
Scn10aQ6QIY3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Scn10aQ6QIY3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.97■■□□□ 1.75
Scn10aQ6QIY3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Scn10aQ6QIY3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Scn10aQ6QIY3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Scn10aQ6QIY3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Scn10aQ6QIY3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Scn10aQ6QIY3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Scn10aQ6QIY3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.95■■□□□ 1.75
Scn10aQ6QIY3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn10aQ6QIY3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn10aQ6QIY3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.95■■□□□ 1.74
Scn10aQ6QIY3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.94■■□□□ 1.74
Scn10aQ6QIY3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.94■■□□□ 1.74
Scn10aQ6QIY3 Etf1-202ENSMUST00000180351 108 ntBASIC25.94■■□□□ 1.74
Scn10aQ6QIY3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.93■■□□□ 1.74
Scn10aQ6QIY3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Scn10aQ6QIY3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Scn10aQ6QIY3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Scn10aQ6QIY3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Scn10aQ6QIY3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Scn10aQ6QIY3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Scn10aQ6QIY3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Scn10aQ6QIY3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scn10aQ6QIY3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scn10aQ6QIY3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.91■■□□□ 1.74
Scn10aQ6QIY3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scn10aQ6QIY3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Scn10aQ6QIY3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Scn10aQ6QIY3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Scn10aQ6QIY3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
Scn10aQ6QIY3 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.89■■□□□ 1.74
Scn10aQ6QIY3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Scn10aQ6QIY3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Scn10aQ6QIY3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.88■■□□□ 1.73
Scn10aQ6QIY3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.87■■□□□ 1.73
Scn10aQ6QIY3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.87■■□□□ 1.73
Scn10aQ6QIY3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Scn10aQ6QIY3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Scn10aQ6QIY3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.87■■□□□ 1.73
Scn10aQ6QIY3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Scn10aQ6QIY3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Scn10aQ6QIY3 Gm21956-201ENSMUST00000179946 522 ntBASIC25.86■■□□□ 1.73
Scn10aQ6QIY3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Scn10aQ6QIY3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Scn10aQ6QIY3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.84■■□□□ 1.73
Scn10aQ6QIY3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Scn10aQ6QIY3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.84■■□□□ 1.73
Scn10aQ6QIY3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Scn10aQ6QIY3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Scn10aQ6QIY3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Scn10aQ6QIY3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Scn10aQ6QIY3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Scn10aQ6QIY3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Scn10aQ6QIY3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Scn10aQ6QIY3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.82■■□□□ 1.72
Scn10aQ6QIY3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Scn10aQ6QIY3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Scn10aQ6QIY3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Scn10aQ6QIY3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
Scn10aQ6QIY3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Scn10aQ6QIY3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Scn10aQ6QIY3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.8■■□□□ 1.72
Scn10aQ6QIY3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Scn10aQ6QIY3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Scn10aQ6QIY3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.79■■□□□ 1.72
Scn10aQ6QIY3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Scn10aQ6QIY3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Scn10aQ6QIY3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.78■■□□□ 1.72
Scn10aQ6QIY3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.78■■□□□ 1.72
Scn10aQ6QIY3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scn10aQ6QIY3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scn10aQ6QIY3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Scn10aQ6QIY3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scn10aQ6QIY3 Gm13241-201ENSMUST00000094493 780 ntBASIC25.78■■□□□ 1.72
Scn10aQ6QIY3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scn10aQ6QIY3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Scn10aQ6QIY3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.77■■□□□ 1.72
Scn10aQ6QIY3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.77■■□□□ 1.72
Scn10aQ6QIY3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms