Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm45364-201ENSMUST00000210883 159 ntBASIC21.41■■□□□ 1.02
Pcdhga7Q6DD96 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.41■■□□□ 1.02
Pcdhga7Q6DD96 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga7Q6DD96 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhga7Q6DD96 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdhga7Q6DD96 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga7Q6DD96 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdhga7Q6DD96 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhga7Q6DD96 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.4■■□□□ 1.02
Pcdhga7Q6DD96 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.4■■□□□ 1.02
Pcdhga7Q6DD96 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga7Q6DD96 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga7Q6DD96 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga7Q6DD96 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga7Q6DD96 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga7Q6DD96 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga7Q6DD96 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga7Q6DD96 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhga7Q6DD96 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pcdhga7Q6DD96 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.39■■□□□ 1.01
Pcdhga7Q6DD96 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhga7Q6DD96 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.38■■□□□ 1.01
Pcdhga7Q6DD96 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga7Q6DD96 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdhga7Q6DD96 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga7Q6DD96 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga7Q6DD96 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga7Q6DD96 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga7Q6DD96 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga7Q6DD96 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga7Q6DD96 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga7Q6DD96 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga7Q6DD96 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga7Q6DD96 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhga7Q6DD96 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga7Q6DD96 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhga7Q6DD96 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga7Q6DD96 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga7Q6DD96 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga7Q6DD96 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhga7Q6DD96 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga7Q6DD96 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga7Q6DD96 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga7Q6DD96 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga7Q6DD96 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga7Q6DD96 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga7Q6DD96 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga7Q6DD96 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga7Q6DD96 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Pcdhga7Q6DD96 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga7Q6DD96 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
Pcdhga7Q6DD96 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.33■■□□□ 1.01
Pcdhga7Q6DD96 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga7Q6DD96 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga7Q6DD96 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.32■■□□□ 1
Pcdhga7Q6DD96 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga7Q6DD96 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga7Q6DD96 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhga7Q6DD96 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Pcdhga7Q6DD96 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga7Q6DD96 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga7Q6DD96 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga7Q6DD96 Terc-201ENSMUST00000082862 423 ntBASIC21.31■■□□□ 1
Pcdhga7Q6DD96 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhga7Q6DD96 Notumos-201ENSMUST00000151998 2659 ntBASIC21.31■■□□□ 1
Pcdhga7Q6DD96 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga7Q6DD96 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga7Q6DD96 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga7Q6DD96 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga7Q6DD96 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga7Q6DD96 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga7Q6DD96 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga7Q6DD96 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga7Q6DD96 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhga7Q6DD96 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.27■■□□□ 1
Pcdhga7Q6DD96 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga7Q6DD96 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga7Q6DD96 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdhga7Q6DD96 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga7Q6DD96 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga7Q6DD96 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhga7Q6DD96 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga7Q6DD96 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhga7Q6DD96 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga7Q6DD96 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga7Q6DD96 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga7Q6DD96 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga7Q6DD96 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga7Q6DD96 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga7Q6DD96 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.23■□□□□ 0.99
Pcdhga7Q6DD96 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhga7Q6DD96 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 147 ms