Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
VcanQ62059 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.4■■□□□ 1.02
VcanQ62059 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VcanQ62059 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VcanQ62059 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VcanQ62059 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VcanQ62059 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VcanQ62059 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VcanQ62059 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VcanQ62059 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VcanQ62059 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VcanQ62059 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.39■■□□□ 1.01
VcanQ62059 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VcanQ62059 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VcanQ62059 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VcanQ62059 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VcanQ62059 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.36■■□□□ 1.01
VcanQ62059 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.36■■□□□ 1.01
VcanQ62059 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
VcanQ62059 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.36■■□□□ 1.01
VcanQ62059 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VcanQ62059 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VcanQ62059 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.35■■□□□ 1.01
VcanQ62059 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
VcanQ62059 Gm7417-201ENSMUST00000192950 473 ntBASIC21.35■■□□□ 1.01
VcanQ62059 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VcanQ62059 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VcanQ62059 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VcanQ62059 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.34■■□□□ 1.01
VcanQ62059 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VcanQ62059 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VcanQ62059 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VcanQ62059 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VcanQ62059 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VcanQ62059 Gm27011-201ENSMUST00000182352 972 ntBASIC21.33■■□□□ 1
VcanQ62059 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.33■■□□□ 1
VcanQ62059 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VcanQ62059 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.32■■□□□ 1
VcanQ62059 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
VcanQ62059 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VcanQ62059 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
VcanQ62059 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VcanQ62059 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VcanQ62059 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.31■■□□□ 1
VcanQ62059 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.31■■□□□ 1
VcanQ62059 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.31■■□□□ 1
VcanQ62059 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.31■■□□□ 1
VcanQ62059 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.31■■□□□ 1
VcanQ62059 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
VcanQ62059 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
VcanQ62059 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.31■■□□□ 1
VcanQ62059 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.3■■□□□ 1
VcanQ62059 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.3■■□□□ 1
VcanQ62059 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
VcanQ62059 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.3■■□□□ 1
VcanQ62059 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.29■■□□□ 1
VcanQ62059 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.29■■□□□ 1
VcanQ62059 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.29■■□□□ 1
VcanQ62059 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VcanQ62059 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
VcanQ62059 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.28■■□□□ 1
VcanQ62059 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.28■■□□□ 1
VcanQ62059 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.28■■□□□ 1
VcanQ62059 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VcanQ62059 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VcanQ62059 Gm45417-201ENSMUST00000209533 758 ntBASIC21.27■■□□□ 1
VcanQ62059 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.27■■□□□ 1
VcanQ62059 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
VcanQ62059 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.27■■□□□ 1
VcanQ62059 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.27■□□□□ 0.99
VcanQ62059 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VcanQ62059 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VcanQ62059 Gm22238-201ENSMUST00000175222 88 ntBASIC21.26■□□□□ 0.99
VcanQ62059 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VcanQ62059 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VcanQ62059 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.25■□□□□ 0.99
VcanQ62059 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VcanQ62059 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VcanQ62059 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VcanQ62059 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.25■□□□□ 0.99
VcanQ62059 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VcanQ62059 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.24■□□□□ 0.99
VcanQ62059 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
VcanQ62059 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VcanQ62059 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VcanQ62059 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VcanQ62059 Golgb1-201ENSMUST00000023534 498 ntBASIC21.23■□□□□ 0.99
VcanQ62059 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VcanQ62059 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VcanQ62059 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VcanQ62059 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.22■□□□□ 0.99
VcanQ62059 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VcanQ62059 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.22■□□□□ 0.99
VcanQ62059 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.22■□□□□ 0.99
VcanQ62059 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VcanQ62059 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.22■□□□□ 0.99
VcanQ62059 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VcanQ62059 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VcanQ62059 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.21■□□□□ 0.99
VcanQ62059 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms