Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clns1aQ61189 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clns1aQ61189 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clns1aQ61189 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clns1aQ61189 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Clns1aQ61189 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clns1aQ61189 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clns1aQ61189 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clns1aQ61189 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clns1aQ61189 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.87■□□□□ 0.61
Clns1aQ61189 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clns1aQ61189 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.87■□□□□ 0.61
Clns1aQ61189 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.87■□□□□ 0.61
Clns1aQ61189 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clns1aQ61189 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Clns1aQ61189 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clns1aQ61189 Gm9397-201ENSMUST00000200125 605 ntBASIC18.86■□□□□ 0.61
Clns1aQ61189 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clns1aQ61189 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.86■□□□□ 0.61
Clns1aQ61189 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clns1aQ61189 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Clns1aQ61189 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clns1aQ61189 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clns1aQ61189 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clns1aQ61189 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clns1aQ61189 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clns1aQ61189 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clns1aQ61189 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Clns1aQ61189 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clns1aQ61189 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Clns1aQ61189 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Clns1aQ61189 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clns1aQ61189 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clns1aQ61189 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clns1aQ61189 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clns1aQ61189 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clns1aQ61189 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clns1aQ61189 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clns1aQ61189 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clns1aQ61189 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clns1aQ61189 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clns1aQ61189 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clns1aQ61189 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.81■□□□□ 0.6
Clns1aQ61189 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Clns1aQ61189 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clns1aQ61189 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clns1aQ61189 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clns1aQ61189 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clns1aQ61189 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clns1aQ61189 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clns1aQ61189 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clns1aQ61189 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clns1aQ61189 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.79■□□□□ 0.6
Clns1aQ61189 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clns1aQ61189 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clns1aQ61189 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clns1aQ61189 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clns1aQ61189 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clns1aQ61189 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.78■□□□□ 0.6
Clns1aQ61189 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clns1aQ61189 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clns1aQ61189 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.77■□□□□ 0.6
Clns1aQ61189 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.77■□□□□ 0.6
Clns1aQ61189 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clns1aQ61189 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clns1aQ61189 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clns1aQ61189 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.76■□□□□ 0.59
Clns1aQ61189 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clns1aQ61189 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clns1aQ61189 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.76■□□□□ 0.59
Clns1aQ61189 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Clns1aQ61189 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clns1aQ61189 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clns1aQ61189 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clns1aQ61189 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clns1aQ61189 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Clns1aQ61189 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Clns1aQ61189 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clns1aQ61189 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clns1aQ61189 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clns1aQ61189 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clns1aQ61189 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Clns1aQ61189 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clns1aQ61189 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clns1aQ61189 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clns1aQ61189 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clns1aQ61189 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clns1aQ61189 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clns1aQ61189 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Clns1aQ61189 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clns1aQ61189 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Clns1aQ61189 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.72■□□□□ 0.59
Clns1aQ61189 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clns1aQ61189 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clns1aQ61189 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clns1aQ61189 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.71■□□□□ 0.59
Clns1aQ61189 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clns1aQ61189 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clns1aQ61189 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clns1aQ61189 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms