Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
R3hdm4Q4VBF2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
R3hdm4Q4VBF2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
R3hdm4Q4VBF2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
R3hdm4Q4VBF2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
R3hdm4Q4VBF2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
R3hdm4Q4VBF2 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.02■■□□□ 1.44
R3hdm4Q4VBF2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
R3hdm4Q4VBF2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
R3hdm4Q4VBF2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.01■■□□□ 1.43
R3hdm4Q4VBF2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
R3hdm4Q4VBF2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.01■■□□□ 1.43
R3hdm4Q4VBF2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
R3hdm4Q4VBF2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
R3hdm4Q4VBF2 Gm6934-201ENSMUST00000194780 1905 ntBASIC24■■□□□ 1.43
R3hdm4Q4VBF2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24■■□□□ 1.43
R3hdm4Q4VBF2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
R3hdm4Q4VBF2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
R3hdm4Q4VBF2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
R3hdm4Q4VBF2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
R3hdm4Q4VBF2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
R3hdm4Q4VBF2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
R3hdm4Q4VBF2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
R3hdm4Q4VBF2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
R3hdm4Q4VBF2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
R3hdm4Q4VBF2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
R3hdm4Q4VBF2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
R3hdm4Q4VBF2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
R3hdm4Q4VBF2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.98■■□□□ 1.43
R3hdm4Q4VBF2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
R3hdm4Q4VBF2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
R3hdm4Q4VBF2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
R3hdm4Q4VBF2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
R3hdm4Q4VBF2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
R3hdm4Q4VBF2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
R3hdm4Q4VBF2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
R3hdm4Q4VBF2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
R3hdm4Q4VBF2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
R3hdm4Q4VBF2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.96■■□□□ 1.43
R3hdm4Q4VBF2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
R3hdm4Q4VBF2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
R3hdm4Q4VBF2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
R3hdm4Q4VBF2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
R3hdm4Q4VBF2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
R3hdm4Q4VBF2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
R3hdm4Q4VBF2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.94■■□□□ 1.42
R3hdm4Q4VBF2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
R3hdm4Q4VBF2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.94■■□□□ 1.42
R3hdm4Q4VBF2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
R3hdm4Q4VBF2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
R3hdm4Q4VBF2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
R3hdm4Q4VBF2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.93■■□□□ 1.42
R3hdm4Q4VBF2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
R3hdm4Q4VBF2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
R3hdm4Q4VBF2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
R3hdm4Q4VBF2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
R3hdm4Q4VBF2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
R3hdm4Q4VBF2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
R3hdm4Q4VBF2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
R3hdm4Q4VBF2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
R3hdm4Q4VBF2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
R3hdm4Q4VBF2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
R3hdm4Q4VBF2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
R3hdm4Q4VBF2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
R3hdm4Q4VBF2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
R3hdm4Q4VBF2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
R3hdm4Q4VBF2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
R3hdm4Q4VBF2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.88■■□□□ 1.41
R3hdm4Q4VBF2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
R3hdm4Q4VBF2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
R3hdm4Q4VBF2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
R3hdm4Q4VBF2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.87■■□□□ 1.41
R3hdm4Q4VBF2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
R3hdm4Q4VBF2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
R3hdm4Q4VBF2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
R3hdm4Q4VBF2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
R3hdm4Q4VBF2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.86■■□□□ 1.41
R3hdm4Q4VBF2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.86■■□□□ 1.41
R3hdm4Q4VBF2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
R3hdm4Q4VBF2 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.86■■□□□ 1.41
R3hdm4Q4VBF2 Gm10420-201ENSMUST00000121713 882 ntBASIC23.85■■□□□ 1.41
R3hdm4Q4VBF2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm4Q4VBF2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm4Q4VBF2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
R3hdm4Q4VBF2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
R3hdm4Q4VBF2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
R3hdm4Q4VBF2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
R3hdm4Q4VBF2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
R3hdm4Q4VBF2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
R3hdm4Q4VBF2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
R3hdm4Q4VBF2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
R3hdm4Q4VBF2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
R3hdm4Q4VBF2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
R3hdm4Q4VBF2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
R3hdm4Q4VBF2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
R3hdm4Q4VBF2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
R3hdm4Q4VBF2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
R3hdm4Q4VBF2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
R3hdm4Q4VBF2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
R3hdm4Q4VBF2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms