Protein–RNA interactions for Protein: Q3UM18

Lsg1, Large subunit GTPase 1 homolog, mousemouse

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsg1Q3UM18 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Lsg1Q3UM18 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Lsg1Q3UM18 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Lsg1Q3UM18 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Lsg1Q3UM18 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lsg1Q3UM18 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.28■■□□□ 1
Lsg1Q3UM18 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Lsg1Q3UM18 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lsg1Q3UM18 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.28■■□□□ 1
Lsg1Q3UM18 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.28■■□□□ 1
Lsg1Q3UM18 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.28■■□□□ 1
Lsg1Q3UM18 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Lsg1Q3UM18 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Lsg1Q3UM18 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsg1Q3UM18 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Lsg1Q3UM18 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lsg1Q3UM18 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Lsg1Q3UM18 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lsg1Q3UM18 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Lsg1Q3UM18 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lsg1Q3UM18 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsg1Q3UM18 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Lsg1Q3UM18 Particl-201ENSMUST00000205370 1560 ntBASIC21.26■□□□□ 0.99
Lsg1Q3UM18 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.25■□□□□ 0.99
Lsg1Q3UM18 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsg1Q3UM18 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsg1Q3UM18 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lsg1Q3UM18 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lsg1Q3UM18 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsg1Q3UM18 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsg1Q3UM18 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Lsg1Q3UM18 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsg1Q3UM18 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsg1Q3UM18 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Lsg1Q3UM18 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.22■□□□□ 0.99
Lsg1Q3UM18 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.22■□□□□ 0.99
Lsg1Q3UM18 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lsg1Q3UM18 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsg1Q3UM18 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsg1Q3UM18 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lsg1Q3UM18 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lsg1Q3UM18 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.21■□□□□ 0.99
Lsg1Q3UM18 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsg1Q3UM18 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsg1Q3UM18 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.2■□□□□ 0.99
Lsg1Q3UM18 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Lsg1Q3UM18 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Lsg1Q3UM18 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsg1Q3UM18 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lsg1Q3UM18 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lsg1Q3UM18 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.2■□□□□ 0.98
Lsg1Q3UM18 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.2■□□□□ 0.98
Lsg1Q3UM18 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Lsg1Q3UM18 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsg1Q3UM18 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsg1Q3UM18 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsg1Q3UM18 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsg1Q3UM18 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsg1Q3UM18 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsg1Q3UM18 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsg1Q3UM18 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lsg1Q3UM18 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lsg1Q3UM18 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsg1Q3UM18 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lsg1Q3UM18 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsg1Q3UM18 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsg1Q3UM18 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsg1Q3UM18 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Lsg1Q3UM18 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsg1Q3UM18 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsg1Q3UM18 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lsg1Q3UM18 Gm11599-201ENSMUST00000118720 878 ntBASIC21.16■□□□□ 0.98
Lsg1Q3UM18 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsg1Q3UM18 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Lsg1Q3UM18 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsg1Q3UM18 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsg1Q3UM18 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.15■□□□□ 0.98
Lsg1Q3UM18 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsg1Q3UM18 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsg1Q3UM18 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.15■□□□□ 0.98
Lsg1Q3UM18 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsg1Q3UM18 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.15■□□□□ 0.98
Lsg1Q3UM18 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsg1Q3UM18 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lsg1Q3UM18 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsg1Q3UM18 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.14■□□□□ 0.97
Lsg1Q3UM18 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsg1Q3UM18 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsg1Q3UM18 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Lsg1Q3UM18 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsg1Q3UM18 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsg1Q3UM18 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms