Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Fndc4Q3TR08 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Fndc4Q3TR08 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fndc4Q3TR08 Gm11599-201ENSMUST00000118720 878 ntBASIC18.68■□□□□ 0.58
Fndc4Q3TR08 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fndc4Q3TR08 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.68■□□□□ 0.58
Fndc4Q3TR08 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Fndc4Q3TR08 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Fndc4Q3TR08 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fndc4Q3TR08 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fndc4Q3TR08 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fndc4Q3TR08 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fndc4Q3TR08 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fndc4Q3TR08 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fndc4Q3TR08 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Fndc4Q3TR08 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fndc4Q3TR08 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fndc4Q3TR08 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fndc4Q3TR08 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Fndc4Q3TR08 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fndc4Q3TR08 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.64■□□□□ 0.57
Fndc4Q3TR08 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.63■□□□□ 0.57
Fndc4Q3TR08 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.63■□□□□ 0.57
Fndc4Q3TR08 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.63■□□□□ 0.57
Fndc4Q3TR08 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fndc4Q3TR08 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.62■□□□□ 0.57
Fndc4Q3TR08 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fndc4Q3TR08 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Fndc4Q3TR08 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fndc4Q3TR08 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fndc4Q3TR08 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fndc4Q3TR08 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fndc4Q3TR08 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Fndc4Q3TR08 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Fndc4Q3TR08 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fndc4Q3TR08 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fndc4Q3TR08 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fndc4Q3TR08 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fndc4Q3TR08 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Fndc4Q3TR08 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fndc4Q3TR08 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.59■□□□□ 0.57
Fndc4Q3TR08 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Fndc4Q3TR08 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fndc4Q3TR08 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.59■□□□□ 0.57
Fndc4Q3TR08 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fndc4Q3TR08 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Fndc4Q3TR08 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Fndc4Q3TR08 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fndc4Q3TR08 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fndc4Q3TR08 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fndc4Q3TR08 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fndc4Q3TR08 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fndc4Q3TR08 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fndc4Q3TR08 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fndc4Q3TR08 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fndc4Q3TR08 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fndc4Q3TR08 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.56■□□□□ 0.56
Fndc4Q3TR08 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fndc4Q3TR08 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Fndc4Q3TR08 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Fndc4Q3TR08 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms