Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sem1P60897 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sem1P60897 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sem1P60897 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sem1P60897 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sem1P60897 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sem1P60897 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sem1P60897 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sem1P60897 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Sem1P60897 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sem1P60897 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sem1P60897 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Sem1P60897 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.08■□□□□ 0.96
Sem1P60897 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sem1P60897 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sem1P60897 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sem1P60897 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.07■□□□□ 0.96
Sem1P60897 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sem1P60897 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sem1P60897 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sem1P60897 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sem1P60897 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sem1P60897 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sem1P60897 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sem1P60897 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sem1P60897 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.06■□□□□ 0.96
Sem1P60897 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sem1P60897 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sem1P60897 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sem1P60897 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sem1P60897 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sem1P60897 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sem1P60897 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sem1P60897 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.05■□□□□ 0.96
Sem1P60897 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sem1P60897 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sem1P60897 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sem1P60897 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sem1P60897 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sem1P60897 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sem1P60897 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sem1P60897 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sem1P60897 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sem1P60897 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sem1P60897 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sem1P60897 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sem1P60897 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Sem1P60897 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sem1P60897 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.01■□□□□ 0.95
Sem1P60897 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sem1P60897 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sem1P60897 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.01■□□□□ 0.95
Sem1P60897 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sem1P60897 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sem1P60897 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sem1P60897 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sem1P60897 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sem1P60897 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sem1P60897 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sem1P60897 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sem1P60897 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sem1P60897 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sem1P60897 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sem1P60897 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sem1P60897 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sem1P60897 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.97■□□□□ 0.95
Sem1P60897 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sem1P60897 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sem1P60897 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.96■□□□□ 0.95
Sem1P60897 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sem1P60897 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sem1P60897 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Sem1P60897 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sem1P60897 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sem1P60897 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sem1P60897 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sem1P60897 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sem1P60897 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.94■□□□□ 0.94
Sem1P60897 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sem1P60897 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sem1P60897 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sem1P60897 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sem1P60897 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sem1P60897 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Sem1P60897 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sem1P60897 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.93■□□□□ 0.94
Sem1P60897 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sem1P60897 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sem1P60897 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sem1P60897 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sem1P60897 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.92■□□□□ 0.94
Sem1P60897 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sem1P60897 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sem1P60897 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sem1P60897 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sem1P60897 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sem1P60897 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sem1P60897 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sem1P60897 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sem1P60897 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms