Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Kdm5cP41230 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC33.26■■■□□ 2.91
Kdm5cP41230 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Kdm5cP41230 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Kdm5cP41230 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
Kdm5cP41230 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Kdm5cP41230 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
Kdm5cP41230 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC33.25■■■□□ 2.91
Kdm5cP41230 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
Kdm5cP41230 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
Kdm5cP41230 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Kdm5cP41230 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Kdm5cP41230 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Kdm5cP41230 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Kdm5cP41230 Gm21956-201ENSMUST00000179946 522 ntBASIC33.21■■■□□ 2.91
Kdm5cP41230 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Kdm5cP41230 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Kdm5cP41230 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
Kdm5cP41230 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC33.21■■■□□ 2.91
Kdm5cP41230 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Kdm5cP41230 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Kdm5cP41230 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Kdm5cP41230 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC33.19■■■□□ 2.9
Kdm5cP41230 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC33.19■■■□□ 2.9
Kdm5cP41230 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Kdm5cP41230 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
Kdm5cP41230 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
Kdm5cP41230 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Kdm5cP41230 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Kdm5cP41230 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
Kdm5cP41230 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC33.16■■■□□ 2.9
Kdm5cP41230 Gm13241-201ENSMUST00000094493 780 ntBASIC33.16■■■□□ 2.9
Kdm5cP41230 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Kdm5cP41230 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Kdm5cP41230 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC33.15■■■□□ 2.9
Kdm5cP41230 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC33.14■■■□□ 2.9
Kdm5cP41230 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC33.14■■■□□ 2.9
Kdm5cP41230 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
Kdm5cP41230 Gm16464-201ENSMUST00000117815 1095 ntBASIC33.14■■■□□ 2.9
Kdm5cP41230 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.89
Kdm5cP41230 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Kdm5cP41230 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Kdm5cP41230 Gm7199-201ENSMUST00000118327 1485 ntBASIC33.11■■■□□ 2.89
Kdm5cP41230 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Kdm5cP41230 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Kdm5cP41230 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Kdm5cP41230 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Kdm5cP41230 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC33.09■■■□□ 2.89
Kdm5cP41230 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Kdm5cP41230 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC33.07■■■□□ 2.88
Kdm5cP41230 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC33.06■■■□□ 2.88
Kdm5cP41230 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Kdm5cP41230 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Kdm5cP41230 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
Kdm5cP41230 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC33.05■■■□□ 2.88
Kdm5cP41230 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Kdm5cP41230 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC33.04■■■□□ 2.88
Kdm5cP41230 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Kdm5cP41230 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Kdm5cP41230 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC33.02■■■□□ 2.88
Kdm5cP41230 Serp2-204ENSMUST00000228055 705 ntBASIC33.01■■■□□ 2.88
Kdm5cP41230 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
Kdm5cP41230 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC33.01■■■□□ 2.87
Kdm5cP41230 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC33■■■□□ 2.87
Kdm5cP41230 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC33■■■□□ 2.87
Kdm5cP41230 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Kdm5cP41230 Gm22238-201ENSMUST00000175222 88 ntBASIC32.99■■■□□ 2.87
Kdm5cP41230 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
Kdm5cP41230 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC32.98■■■□□ 2.87
Kdm5cP41230 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Kdm5cP41230 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC32.97■■■□□ 2.87
Kdm5cP41230 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Kdm5cP41230 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Kdm5cP41230 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
Kdm5cP41230 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Kdm5cP41230 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Kdm5cP41230 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC32.96■■■□□ 2.87
Kdm5cP41230 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Kdm5cP41230 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Kdm5cP41230 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Kdm5cP41230 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC32.95■■■□□ 2.87
Kdm5cP41230 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Kdm5cP41230 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Kdm5cP41230 Gm7417-201ENSMUST00000192950 473 ntBASIC32.95■■■□□ 2.86
Kdm5cP41230 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Kdm5cP41230 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Kdm5cP41230 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC32.94■■■□□ 2.86
Kdm5cP41230 Gm43034-201ENSMUST00000198678 1364 ntBASIC32.94■■■□□ 2.86
Kdm5cP41230 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
Kdm5cP41230 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC32.92■■■□□ 2.86
Kdm5cP41230 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC32.92■■■□□ 2.86
Kdm5cP41230 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Kdm5cP41230 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC32.92■■■□□ 2.86
Kdm5cP41230 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Kdm5cP41230 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Kdm5cP41230 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC32.92■■■□□ 2.86
Kdm5cP41230 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Kdm5cP41230 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC32.92■■■□□ 2.86
Kdm5cP41230 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC32.92■■■□□ 2.86
Kdm5cP41230 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms