Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh4P39038 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cdh4P39038 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.13■□□□□ 0.97
Cdh4P39038 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh4P39038 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh4P39038 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh4P39038 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.11■□□□□ 0.97
Cdh4P39038 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cdh4P39038 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh4P39038 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh4P39038 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cdh4P39038 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh4P39038 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh4P39038 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cdh4P39038 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh4P39038 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh4P39038 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh4P39038 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh4P39038 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh4P39038 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.08■□□□□ 0.97
Cdh4P39038 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh4P39038 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Cdh4P39038 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh4P39038 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdh4P39038 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Cdh4P39038 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh4P39038 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh4P39038 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh4P39038 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh4P39038 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh4P39038 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh4P39038 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cdh4P39038 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cdh4P39038 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh4P39038 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh4P39038 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh4P39038 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh4P39038 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cdh4P39038 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdh4P39038 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh4P39038 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cdh4P39038 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh4P39038 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Cdh4P39038 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Cdh4P39038 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh4P39038 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh4P39038 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh4P39038 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh4P39038 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh4P39038 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh4P39038 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh4P39038 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh4P39038 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh4P39038 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh4P39038 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh4P39038 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh4P39038 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh4P39038 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh4P39038 Gm10420-201ENSMUST00000121713 882 ntBASIC21■□□□□ 0.95
Cdh4P39038 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21■□□□□ 0.95
Cdh4P39038 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cdh4P39038 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh4P39038 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh4P39038 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Cdh4P39038 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh4P39038 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh4P39038 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh4P39038 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cdh4P39038 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh4P39038 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.98■□□□□ 0.95
Cdh4P39038 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh4P39038 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cdh4P39038 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh4P39038 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh4P39038 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh4P39038 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh4P39038 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.97■□□□□ 0.95
Cdh4P39038 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh4P39038 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh4P39038 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.96■□□□□ 0.95
Cdh4P39038 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cdh4P39038 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh4P39038 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh4P39038 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh4P39038 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cdh4P39038 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh4P39038 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
Cdh4P39038 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh4P39038 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.95■□□□□ 0.94
Cdh4P39038 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.95■□□□□ 0.94
Cdh4P39038 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh4P39038 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh4P39038 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.94■□□□□ 0.94
Cdh4P39038 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh4P39038 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh4P39038 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cdh4P39038 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh4P39038 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh4P39038 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh4P39038 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms