Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk2P38575 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Upk2P38575 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.43■□□□□ 0.7
Upk2P38575 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk2P38575 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk2P38575 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk2P38575 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk2P38575 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk2P38575 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk2P38575 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk2P38575 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk2P38575 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upk2P38575 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Upk2P38575 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Upk2P38575 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upk2P38575 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Upk2P38575 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.41■□□□□ 0.7
Upk2P38575 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Upk2P38575 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk2P38575 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.4■□□□□ 0.7
Upk2P38575 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.4■□□□□ 0.7
Upk2P38575 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk2P38575 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk2P38575 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Upk2P38575 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Upk2P38575 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk2P38575 Gm11687-201ENSMUST00000118911 886 ntBASIC19.39■□□□□ 0.69
Upk2P38575 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk2P38575 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Upk2P38575 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk2P38575 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Upk2P38575 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk2P38575 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upk2P38575 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk2P38575 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk2P38575 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk2P38575 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upk2P38575 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.36■□□□□ 0.69
Upk2P38575 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.36■□□□□ 0.69
Upk2P38575 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk2P38575 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Upk2P38575 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk2P38575 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk2P38575 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upk2P38575 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk2P38575 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk2P38575 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Upk2P38575 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Upk2P38575 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk2P38575 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.34■□□□□ 0.69
Upk2P38575 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upk2P38575 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Upk2P38575 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.33■□□□□ 0.68
Upk2P38575 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.33■□□□□ 0.68
Upk2P38575 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upk2P38575 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk2P38575 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk2P38575 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.32■□□□□ 0.68
Upk2P38575 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.32■□□□□ 0.68
Upk2P38575 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk2P38575 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk2P38575 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upk2P38575 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk2P38575 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.31■□□□□ 0.68
Upk2P38575 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk2P38575 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk2P38575 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upk2P38575 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk2P38575 Gm22567-201ENSMUST00000175542 342 ntBASIC19.3■□□□□ 0.68
Upk2P38575 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Upk2P38575 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk2P38575 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Upk2P38575 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk2P38575 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk2P38575 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upk2P38575 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Upk2P38575 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk2P38575 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.29■□□□□ 0.68
Upk2P38575 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk2P38575 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Upk2P38575 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upk2P38575 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk2P38575 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Upk2P38575 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Upk2P38575 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Upk2P38575 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upk2P38575 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk2P38575 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk2P38575 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk2P38575 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.27■□□□□ 0.68
Upk2P38575 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Upk2P38575 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms