Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
LdlrP35951 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LdlrP35951 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LdlrP35951 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LdlrP35951 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LdlrP35951 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LdlrP35951 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.92■■□□□ 1.1
LdlrP35951 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.92■■□□□ 1.1
LdlrP35951 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LdlrP35951 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LdlrP35951 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LdlrP35951 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LdlrP35951 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LdlrP35951 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LdlrP35951 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LdlrP35951 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LdlrP35951 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.9■■□□□ 1.1
LdlrP35951 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.9■■□□□ 1.1
LdlrP35951 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LdlrP35951 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LdlrP35951 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
LdlrP35951 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.89■■□□□ 1.09
LdlrP35951 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
LdlrP35951 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
LdlrP35951 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LdlrP35951 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.88■■□□□ 1.09
LdlrP35951 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LdlrP35951 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LdlrP35951 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.87■■□□□ 1.09
LdlrP35951 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
LdlrP35951 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LdlrP35951 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LdlrP35951 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.86■■□□□ 1.09
LdlrP35951 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LdlrP35951 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LdlrP35951 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
LdlrP35951 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LdlrP35951 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.85■■□□□ 1.09
LdlrP35951 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LdlrP35951 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.85■■□□□ 1.09
LdlrP35951 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LdlrP35951 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LdlrP35951 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LdlrP35951 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LdlrP35951 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LdlrP35951 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LdlrP35951 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LdlrP35951 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LdlrP35951 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LdlrP35951 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LdlrP35951 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LdlrP35951 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LdlrP35951 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.84■■□□□ 1.09
LdlrP35951 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LdlrP35951 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LdlrP35951 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.83■■□□□ 1.08
LdlrP35951 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LdlrP35951 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LdlrP35951 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LdlrP35951 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LdlrP35951 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LdlrP35951 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LdlrP35951 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LdlrP35951 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.81■■□□□ 1.08
LdlrP35951 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LdlrP35951 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LdlrP35951 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LdlrP35951 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LdlrP35951 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LdlrP35951 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.8■■□□□ 1.08
LdlrP35951 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LdlrP35951 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LdlrP35951 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.79■■□□□ 1.08
LdlrP35951 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LdlrP35951 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LdlrP35951 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.79■■□□□ 1.08
LdlrP35951 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LdlrP35951 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
LdlrP35951 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LdlrP35951 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LdlrP35951 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LdlrP35951 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LdlrP35951 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LdlrP35951 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LdlrP35951 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LdlrP35951 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.77■■□□□ 1.08
LdlrP35951 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LdlrP35951 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.77■■□□□ 1.08
LdlrP35951 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
LdlrP35951 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LdlrP35951 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LdlrP35951 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LdlrP35951 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LdlrP35951 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LdlrP35951 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LdlrP35951 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LdlrP35951 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LdlrP35951 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LdlrP35951 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LdlrP35951 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms