Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RetP35546 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RetP35546 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RetP35546 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RetP35546 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.61■□□□□ 0.89
RetP35546 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RetP35546 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RetP35546 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RetP35546 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RetP35546 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RetP35546 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RetP35546 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RetP35546 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RetP35546 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.59■□□□□ 0.89
RetP35546 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RetP35546 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RetP35546 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.58■□□□□ 0.89
RetP35546 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.58■□□□□ 0.89
RetP35546 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.58■□□□□ 0.89
RetP35546 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RetP35546 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RetP35546 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RetP35546 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RetP35546 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RetP35546 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RetP35546 Gm15546-201ENSMUST00000122095 826 ntBASIC20.57■□□□□ 0.88
RetP35546 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RetP35546 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.57■□□□□ 0.88
RetP35546 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
RetP35546 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RetP35546 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RetP35546 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RetP35546 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RetP35546 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RetP35546 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RetP35546 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
RetP35546 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RetP35546 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RetP35546 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RetP35546 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RetP35546 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RetP35546 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RetP35546 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.54■□□□□ 0.88
RetP35546 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
RetP35546 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.54■□□□□ 0.88
RetP35546 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RetP35546 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RetP35546 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RetP35546 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RetP35546 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.53■□□□□ 0.88
RetP35546 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RetP35546 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RetP35546 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RetP35546 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RetP35546 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RetP35546 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
RetP35546 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RetP35546 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
RetP35546 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RetP35546 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RetP35546 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RetP35546 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RetP35546 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RetP35546 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RetP35546 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RetP35546 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.5■□□□□ 0.87
RetP35546 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RetP35546 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RetP35546 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RetP35546 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RetP35546 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.49■□□□□ 0.87
RetP35546 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RetP35546 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.49■□□□□ 0.87
RetP35546 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RetP35546 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RetP35546 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RetP35546 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RetP35546 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RetP35546 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RetP35546 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RetP35546 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
RetP35546 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RetP35546 Terc-201ENSMUST00000082862 423 ntBASIC20.48■□□□□ 0.87
RetP35546 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RetP35546 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RetP35546 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RetP35546 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RetP35546 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RetP35546 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RetP35546 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RetP35546 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.46■□□□□ 0.87
RetP35546 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RetP35546 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RetP35546 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
RetP35546 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.46■□□□□ 0.87
RetP35546 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RetP35546 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RetP35546 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RetP35546 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RetP35546 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms