Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PdgfbP31240 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PdgfbP31240 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.72■■□□□ 1.23
PdgfbP31240 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PdgfbP31240 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.7■■□□□ 1.23
PdgfbP31240 Gm21956-201ENSMUST00000179946 522 ntBASIC22.7■■□□□ 1.22
PdgfbP31240 Gm7417-201ENSMUST00000192950 473 ntBASIC22.7■■□□□ 1.22
PdgfbP31240 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfbP31240 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfbP31240 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PdgfbP31240 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfbP31240 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfbP31240 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfbP31240 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PdgfbP31240 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PdgfbP31240 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.68■■□□□ 1.22
PdgfbP31240 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PdgfbP31240 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PdgfbP31240 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.67■■□□□ 1.22
PdgfbP31240 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PdgfbP31240 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.66■■□□□ 1.22
PdgfbP31240 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PdgfbP31240 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.66■■□□□ 1.22
PdgfbP31240 Amer2-203ENSMUST00000225247 2662 ntBASIC22.66■■□□□ 1.22
PdgfbP31240 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PdgfbP31240 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.65■■□□□ 1.22
PdgfbP31240 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfbP31240 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfbP31240 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PdgfbP31240 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.64■■□□□ 1.22
PdgfbP31240 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PdgfbP31240 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.64■■□□□ 1.21
PdgfbP31240 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.64■■□□□ 1.21
PdgfbP31240 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfbP31240 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.63■■□□□ 1.21
PdgfbP31240 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
PdgfbP31240 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.63■■□□□ 1.21
PdgfbP31240 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.63■■□□□ 1.21
PdgfbP31240 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfbP31240 Gm9847-201ENSMUST00000052528 599 ntBASIC22.63■■□□□ 1.21
PdgfbP31240 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PdgfbP31240 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.62■■□□□ 1.21
PdgfbP31240 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PdgfbP31240 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PdgfbP31240 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.61■■□□□ 1.21
PdgfbP31240 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PdgfbP31240 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PdgfbP31240 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PdgfbP31240 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PdgfbP31240 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.61■■□□□ 1.21
PdgfbP31240 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PdgfbP31240 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PdgfbP31240 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PdgfbP31240 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PdgfbP31240 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PdgfbP31240 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PdgfbP31240 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.59■■□□□ 1.21
PdgfbP31240 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.58■■□□□ 1.21
PdgfbP31240 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PdgfbP31240 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PdgfbP31240 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.58■■□□□ 1.21
PdgfbP31240 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.58■■□□□ 1.21
PdgfbP31240 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PdgfbP31240 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
PdgfbP31240 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PdgfbP31240 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.56■■□□□ 1.2
PdgfbP31240 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PdgfbP31240 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
PdgfbP31240 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Gm22238-201ENSMUST00000175222 88 ntBASIC22.55■■□□□ 1.2
PdgfbP31240 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.55■■□□□ 1.2
PdgfbP31240 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.55■■□□□ 1.2
PdgfbP31240 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.55■■□□□ 1.2
PdgfbP31240 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PdgfbP31240 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PdgfbP31240 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PdgfbP31240 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PdgfbP31240 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.54■■□□□ 1.2
PdgfbP31240 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.54■■□□□ 1.2
PdgfbP31240 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PdgfbP31240 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PdgfbP31240 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
PdgfbP31240 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PdgfbP31240 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.52■■□□□ 1.2
PdgfbP31240 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PdgfbP31240 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.51■■□□□ 1.19
PdgfbP31240 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms