Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Notumos-201ENSMUST00000151998 2659 ntBASIC13.97□□□□□ -0.17
P06320 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P06320 Gm43863-201ENSMUST00000203822 1192 ntBASIC13.97□□□□□ -0.17
P06320 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06320 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06320 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06320 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06320 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06320 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P06320 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06320 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06320 Gm38160-201ENSMUST00000193090 2499 ntBASIC13.96□□□□□ -0.17
P06320 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06320 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC13.96□□□□□ -0.17
P06320 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06320 AC157572.2-201ENSMUST00000226970 908 ntBASIC13.96□□□□□ -0.17
P06320 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P06320 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06320 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
P06320 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
P06320 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
P06320 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06320 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06320 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06320 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
P06320 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06320 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06320 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC13.94□□□□□ -0.18
P06320 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06320 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P06320 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P06320 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P06320 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
P06320 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
P06320 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P06320 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P06320 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P06320 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06320 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06320 Gm30023-201ENSMUST00000197970 889 ntBASIC13.92□□□□□ -0.18
P06320 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06320 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC13.92□□□□□ -0.18
P06320 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06320 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06320 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06320 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC13.91□□□□□ -0.18
P06320 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06320 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
P06320 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06320 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P06320 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06320 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.9□□□□□ -0.18
P06320 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC13.9□□□□□ -0.18
P06320 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06320 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06320 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
P06320 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC13.9□□□□□ -0.18
P06320 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
P06320 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P06320 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
P06320 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC13.89□□□□□ -0.19
P06320 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC13.89□□□□□ -0.19
P06320 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06320 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06320 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06320 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06320 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
P06320 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06320 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P06320 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P06320 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
P06320 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
P06320 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P06320 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms