Protein–RNA interactions for Protein: P00416

mt-Co3, Cytochrome c oxidase subunit 3, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
mt-Co3P00416 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
mt-Co3P00416 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
mt-Co3P00416 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
mt-Co3P00416 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.17■■□□□ 1.3
mt-Co3P00416 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.17■■□□□ 1.3
mt-Co3P00416 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
mt-Co3P00416 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
mt-Co3P00416 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
mt-Co3P00416 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
mt-Co3P00416 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
mt-Co3P00416 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
mt-Co3P00416 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.15■■□□□ 1.3
mt-Co3P00416 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
mt-Co3P00416 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
mt-Co3P00416 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
mt-Co3P00416 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
mt-Co3P00416 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
mt-Co3P00416 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
mt-Co3P00416 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
mt-Co3P00416 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.13■■□□□ 1.29
mt-Co3P00416 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
mt-Co3P00416 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
mt-Co3P00416 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
mt-Co3P00416 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.12■■□□□ 1.29
mt-Co3P00416 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.12■■□□□ 1.29
mt-Co3P00416 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
mt-Co3P00416 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.11■■□□□ 1.29
mt-Co3P00416 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
mt-Co3P00416 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
mt-Co3P00416 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.1■■□□□ 1.29
mt-Co3P00416 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
mt-Co3P00416 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
mt-Co3P00416 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
mt-Co3P00416 Gm22238-201ENSMUST00000175222 88 ntBASIC23.09■■□□□ 1.29
mt-Co3P00416 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.09■■□□□ 1.29
mt-Co3P00416 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
mt-Co3P00416 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
mt-Co3P00416 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
mt-Co3P00416 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
mt-Co3P00416 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.08■■□□□ 1.29
mt-Co3P00416 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
mt-Co3P00416 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.08■■□□□ 1.29
mt-Co3P00416 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
mt-Co3P00416 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
mt-Co3P00416 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
mt-Co3P00416 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
mt-Co3P00416 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
mt-Co3P00416 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
mt-Co3P00416 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
mt-Co3P00416 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
mt-Co3P00416 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.06■■□□□ 1.28
mt-Co3P00416 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.06■■□□□ 1.28
mt-Co3P00416 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
mt-Co3P00416 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
mt-Co3P00416 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
mt-Co3P00416 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
mt-Co3P00416 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
mt-Co3P00416 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.04■■□□□ 1.28
mt-Co3P00416 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.03■■□□□ 1.28
mt-Co3P00416 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
mt-Co3P00416 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.03■■□□□ 1.28
mt-Co3P00416 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
mt-Co3P00416 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
mt-Co3P00416 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
mt-Co3P00416 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
mt-Co3P00416 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.02■■□□□ 1.28
mt-Co3P00416 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
mt-Co3P00416 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
mt-Co3P00416 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
mt-Co3P00416 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
mt-Co3P00416 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
mt-Co3P00416 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
mt-Co3P00416 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
mt-Co3P00416 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.01■■□□□ 1.27
mt-Co3P00416 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
mt-Co3P00416 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.01■■□□□ 1.27
mt-Co3P00416 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
mt-Co3P00416 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23■■□□□ 1.27
mt-Co3P00416 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23■■□□□ 1.27
mt-Co3P00416 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
mt-Co3P00416 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.98■■□□□ 1.27
mt-Co3P00416 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
mt-Co3P00416 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.97■■□□□ 1.27
mt-Co3P00416 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
mt-Co3P00416 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
mt-Co3P00416 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.96■■□□□ 1.27
mt-Co3P00416 Gm40881-201ENSMUST00000223397 166 ntBASIC22.96■■□□□ 1.27
mt-Co3P00416 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.96■■□□□ 1.27
mt-Co3P00416 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
mt-Co3P00416 Gm12821-201ENSMUST00000120022 600 ntBASIC22.95■■□□□ 1.26
mt-Co3P00416 Gm12922-201ENSMUST00000120626 809 ntBASIC22.95■■□□□ 1.26
mt-Co3P00416 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.95■■□□□ 1.26
mt-Co3P00416 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
mt-Co3P00416 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
mt-Co3P00416 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
mt-Co3P00416 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
mt-Co3P00416 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
mt-Co3P00416 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
mt-Co3P00416 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
mt-Co3P00416 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms