Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CcnkO88874 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CcnkO88874 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.46■□□□□ 0.71
CcnkO88874 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CcnkO88874 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CcnkO88874 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CcnkO88874 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.45■□□□□ 0.7
CcnkO88874 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CcnkO88874 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CcnkO88874 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CcnkO88874 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CcnkO88874 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CcnkO88874 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CcnkO88874 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CcnkO88874 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CcnkO88874 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CcnkO88874 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CcnkO88874 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.44■□□□□ 0.7
CcnkO88874 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.44■□□□□ 0.7
CcnkO88874 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
CcnkO88874 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CcnkO88874 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CcnkO88874 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CcnkO88874 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CcnkO88874 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CcnkO88874 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CcnkO88874 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CcnkO88874 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CcnkO88874 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CcnkO88874 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CcnkO88874 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CcnkO88874 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CcnkO88874 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CcnkO88874 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CcnkO88874 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CcnkO88874 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CcnkO88874 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CcnkO88874 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CcnkO88874 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.41■□□□□ 0.7
CcnkO88874 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CcnkO88874 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CcnkO88874 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CcnkO88874 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CcnkO88874 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CcnkO88874 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CcnkO88874 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.41■□□□□ 0.7
CcnkO88874 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CcnkO88874 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CcnkO88874 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CcnkO88874 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CcnkO88874 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CcnkO88874 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.4■□□□□ 0.7
CcnkO88874 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CcnkO88874 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CcnkO88874 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CcnkO88874 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CcnkO88874 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CcnkO88874 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CcnkO88874 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CcnkO88874 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CcnkO88874 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CcnkO88874 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CcnkO88874 Gm7432-201ENSMUST00000210343 879 ntBASIC19.37■□□□□ 0.69
CcnkO88874 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CcnkO88874 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CcnkO88874 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CcnkO88874 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CcnkO88874 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.36■□□□□ 0.69
CcnkO88874 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CcnkO88874 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CcnkO88874 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CcnkO88874 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CcnkO88874 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CcnkO88874 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CcnkO88874 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CcnkO88874 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CcnkO88874 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcnkO88874 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CcnkO88874 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CcnkO88874 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcnkO88874 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcnkO88874 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcnkO88874 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcnkO88874 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CcnkO88874 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CcnkO88874 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CcnkO88874 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CcnkO88874 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CcnkO88874 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.33■□□□□ 0.68
CcnkO88874 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CcnkO88874 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CcnkO88874 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CcnkO88874 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CcnkO88874 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CcnkO88874 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CcnkO88874 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CcnkO88874 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CcnkO88874 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CcnkO88874 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CcnkO88874 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms