Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Capns1O88456 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Capns1O88456 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Capns1O88456 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Capns1O88456 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Capns1O88456 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Capns1O88456 Notumos-201ENSMUST00000151998 2659 ntBASIC20.31■□□□□ 0.84
Capns1O88456 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Capns1O88456 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Capns1O88456 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Capns1O88456 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.31■□□□□ 0.84
Capns1O88456 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Capns1O88456 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Capns1O88456 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Capns1O88456 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Capns1O88456 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Capns1O88456 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Capns1O88456 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.3■□□□□ 0.84
Capns1O88456 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
Capns1O88456 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.3■□□□□ 0.84
Capns1O88456 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.29■□□□□ 0.84
Capns1O88456 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Capns1O88456 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Capns1O88456 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Capns1O88456 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Capns1O88456 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Capns1O88456 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.28■□□□□ 0.84
Capns1O88456 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Capns1O88456 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Capns1O88456 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Capns1O88456 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Capns1O88456 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Capns1O88456 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.26■□□□□ 0.83
Capns1O88456 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.26■□□□□ 0.83
Capns1O88456 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Capns1O88456 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Capns1O88456 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.25■□□□□ 0.83
Capns1O88456 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Capns1O88456 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Capns1O88456 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Capns1O88456 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Capns1O88456 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Capns1O88456 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Capns1O88456 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Capns1O88456 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Capns1O88456 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.23■□□□□ 0.83
Capns1O88456 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Capns1O88456 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.23■□□□□ 0.83
Capns1O88456 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Capns1O88456 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capns1O88456 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.22■□□□□ 0.83
Capns1O88456 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capns1O88456 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capns1O88456 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
Capns1O88456 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capns1O88456 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Capns1O88456 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.21■□□□□ 0.83
Capns1O88456 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.2■□□□□ 0.82
Capns1O88456 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Capns1O88456 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Capns1O88456 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Capns1O88456 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Capns1O88456 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.19■□□□□ 0.82
Capns1O88456 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Capns1O88456 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Capns1O88456 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.18■□□□□ 0.82
Capns1O88456 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Capns1O88456 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.17■□□□□ 0.82
Capns1O88456 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Capns1O88456 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capns1O88456 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Capns1O88456 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capns1O88456 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capns1O88456 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Capns1O88456 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.15■□□□□ 0.82
Capns1O88456 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capns1O88456 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Capns1O88456 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capns1O88456 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capns1O88456 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.13■□□□□ 0.81
Capns1O88456 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.13■□□□□ 0.81
Capns1O88456 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Capns1O88456 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capns1O88456 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms