Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
Cacna1hO88427 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacna1hO88427 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
Cacna1hO88427 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cacna1hO88427 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Cacna1hO88427 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.33■■□□□ 1.16
Cacna1hO88427 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.33■■□□□ 1.16
Cacna1hO88427 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cacna1hO88427 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.31■■□□□ 1.16
Cacna1hO88427 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Cacna1hO88427 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cacna1hO88427 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.29■■□□□ 1.16
Cacna1hO88427 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Cacna1hO88427 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.29■■□□□ 1.16
Cacna1hO88427 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacna1hO88427 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.28■■□□□ 1.16
Cacna1hO88427 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacna1hO88427 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacna1hO88427 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Cacna1hO88427 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacna1hO88427 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacna1hO88427 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacna1hO88427 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacna1hO88427 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.26■■□□□ 1.15
Cacna1hO88427 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cacna1hO88427 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.26■■□□□ 1.15
Cacna1hO88427 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cacna1hO88427 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1hO88427 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1hO88427 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.25■■□□□ 1.15
Cacna1hO88427 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1hO88427 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1hO88427 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.25■■□□□ 1.15
Cacna1hO88427 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Cacna1hO88427 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1hO88427 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacna1hO88427 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacna1hO88427 Golgb1-201ENSMUST00000023534 498 ntBASIC22.24■■□□□ 1.15
Cacna1hO88427 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacna1hO88427 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cacna1hO88427 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.24■■□□□ 1.15
Cacna1hO88427 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1hO88427 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1hO88427 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1hO88427 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1hO88427 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.23■■□□□ 1.15
Cacna1hO88427 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1hO88427 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1hO88427 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1hO88427 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cacna1hO88427 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
Cacna1hO88427 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cacna1hO88427 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cacna1hO88427 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.21■■□□□ 1.15
Cacna1hO88427 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
Cacna1hO88427 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.19■■□□□ 1.14
Cacna1hO88427 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacna1hO88427 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacna1hO88427 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacna1hO88427 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacna1hO88427 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cacna1hO88427 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.19■■□□□ 1.14
Cacna1hO88427 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacna1hO88427 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cacna1hO88427 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.18■■□□□ 1.14
Cacna1hO88427 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.18■■□□□ 1.14
Cacna1hO88427 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacna1hO88427 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Cacna1hO88427 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1hO88427 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1hO88427 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1hO88427 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1hO88427 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1hO88427 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1hO88427 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1hO88427 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1hO88427 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacna1hO88427 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.16■■□□□ 1.14
Cacna1hO88427 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.16■■□□□ 1.14
Cacna1hO88427 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cacna1hO88427 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cacna1hO88427 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.15■■□□□ 1.14
Cacna1hO88427 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Cacna1hO88427 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cacna1hO88427 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cacna1hO88427 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cacna1hO88427 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cacna1hO88427 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1hO88427 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1hO88427 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1hO88427 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1hO88427 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1hO88427 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Cacna1hO88427 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.13■■□□□ 1.13
Cacna1hO88427 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1hO88427 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cacna1hO88427 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cacna1hO88427 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cacna1hO88427 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Cacna1hO88427 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms