Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6dO55057 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6dO55057 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6dO55057 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6dO55057 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6dO55057 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6dO55057 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6dO55057 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6dO55057 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6dO55057 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6dO55057 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6dO55057 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6dO55057 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pde6dO55057 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pde6dO55057 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6dO55057 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6dO55057 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6dO55057 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.45■□□□□ 0.38
Pde6dO55057 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6dO55057 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pde6dO55057 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6dO55057 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6dO55057 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Pde6dO55057 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pde6dO55057 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6dO55057 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.44■□□□□ 0.38
Pde6dO55057 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.44■□□□□ 0.38
Pde6dO55057 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.44■□□□□ 0.38
Pde6dO55057 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6dO55057 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6dO55057 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6dO55057 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6dO55057 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6dO55057 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6dO55057 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.43■□□□□ 0.38
Pde6dO55057 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6dO55057 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6dO55057 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pde6dO55057 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6dO55057 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6dO55057 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6dO55057 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pde6dO55057 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pde6dO55057 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pde6dO55057 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6dO55057 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6dO55057 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Pde6dO55057 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6dO55057 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pde6dO55057 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pde6dO55057 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6dO55057 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6dO55057 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6dO55057 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6dO55057 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6dO55057 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6dO55057 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pde6dO55057 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.39■□□□□ 0.37
Pde6dO55057 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.39■□□□□ 0.37
Pde6dO55057 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.39■□□□□ 0.37
Pde6dO55057 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6dO55057 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6dO55057 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pde6dO55057 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pde6dO55057 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6dO55057 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6dO55057 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6dO55057 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pde6dO55057 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6dO55057 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pde6dO55057 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6dO55057 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6dO55057 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Pde6dO55057 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pde6dO55057 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6dO55057 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6dO55057 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6dO55057 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pde6dO55057 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.37■□□□□ 0.37
Pde6dO55057 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6dO55057 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6dO55057 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.36■□□□□ 0.37
Pde6dO55057 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6dO55057 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6dO55057 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pde6dO55057 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6dO55057 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6dO55057 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6dO55057 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pde6dO55057 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6dO55057 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6dO55057 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6dO55057 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6dO55057 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6dO55057 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.34■□□□□ 0.37
Pde6dO55057 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6dO55057 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6dO55057 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6dO55057 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6dO55057 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms