Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacna1bO55017 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1bO55017 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cacna1bO55017 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1bO55017 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1bO55017 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1bO55017 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cacna1bO55017 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Cacna1bO55017 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1bO55017 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cacna1bO55017 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacna1bO55017 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1bO55017 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1bO55017 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.6■■□□□ 1.05
Cacna1bO55017 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1bO55017 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.6■■□□□ 1.05
Cacna1bO55017 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1bO55017 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1bO55017 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Cacna1bO55017 Serp2-204ENSMUST00000228055 705 ntBASIC21.59■■□□□ 1.05
Cacna1bO55017 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1bO55017 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.59■■□□□ 1.05
Cacna1bO55017 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.59■■□□□ 1.05
Cacna1bO55017 Gm7417-201ENSMUST00000192950 473 ntBASIC21.58■■□□□ 1.05
Cacna1bO55017 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.58■■□□□ 1.05
Cacna1bO55017 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1bO55017 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1bO55017 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cacna1bO55017 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.58■■□□□ 1.04
Cacna1bO55017 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1bO55017 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1bO55017 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cacna1bO55017 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1bO55017 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1bO55017 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cacna1bO55017 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1bO55017 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.57■■□□□ 1.04
Cacna1bO55017 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1bO55017 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.57■■□□□ 1.04
Cacna1bO55017 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.57■■□□□ 1.04
Cacna1bO55017 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1bO55017 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1bO55017 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacna1bO55017 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacna1bO55017 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cacna1bO55017 Gm9847-201ENSMUST00000052528 599 ntBASIC21.55■■□□□ 1.04
Cacna1bO55017 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacna1bO55017 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacna1bO55017 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.55■■□□□ 1.04
Cacna1bO55017 Gm12922-201ENSMUST00000120626 809 ntBASIC21.55■■□□□ 1.04
Cacna1bO55017 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1bO55017 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.54■■□□□ 1.04
Cacna1bO55017 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1bO55017 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.54■■□□□ 1.04
Cacna1bO55017 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1bO55017 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1bO55017 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1bO55017 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1bO55017 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1bO55017 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.52■■□□□ 1.04
Cacna1bO55017 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1bO55017 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1bO55017 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cacna1bO55017 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1bO55017 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1bO55017 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.52■■□□□ 1.04
Cacna1bO55017 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.51■■□□□ 1.03
Cacna1bO55017 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.51■■□□□ 1.03
Cacna1bO55017 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1bO55017 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Cacna1bO55017 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.51■■□□□ 1.03
Cacna1bO55017 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.5■■□□□ 1.03
Cacna1bO55017 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1bO55017 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1bO55017 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1bO55017 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1bO55017 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1bO55017 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1bO55017 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.48■■□□□ 1.03
Cacna1bO55017 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Cacna1bO55017 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1bO55017 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacna1bO55017 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacna1bO55017 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.47■■□□□ 1.03
Cacna1bO55017 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cacna1bO55017 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.47■■□□□ 1.03
Cacna1bO55017 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.47■■□□□ 1.03
Cacna1bO55017 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1bO55017 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.46■■□□□ 1.03
Cacna1bO55017 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1bO55017 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1bO55017 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.46■■□□□ 1.03
Cacna1bO55017 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1bO55017 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.45■■□□□ 1.02
Cacna1bO55017 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.45■■□□□ 1.02
Cacna1bO55017 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1bO55017 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1bO55017 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.45■■□□□ 1.02
Cacna1bO55017 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1bO55017 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms