Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DffbO54788 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DffbO54788 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.86■□□□□ 0.61
DffbO54788 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DffbO54788 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DffbO54788 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DffbO54788 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DffbO54788 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DffbO54788 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DffbO54788 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.85■□□□□ 0.61
DffbO54788 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DffbO54788 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.85■□□□□ 0.61
DffbO54788 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.84■□□□□ 0.61
DffbO54788 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DffbO54788 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DffbO54788 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DffbO54788 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DffbO54788 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DffbO54788 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DffbO54788 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.83■□□□□ 0.6
DffbO54788 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DffbO54788 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DffbO54788 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DffbO54788 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DffbO54788 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DffbO54788 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DffbO54788 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DffbO54788 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DffbO54788 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DffbO54788 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.81■□□□□ 0.6
DffbO54788 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DffbO54788 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
DffbO54788 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DffbO54788 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.81■□□□□ 0.6
DffbO54788 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DffbO54788 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DffbO54788 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DffbO54788 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DffbO54788 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DffbO54788 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DffbO54788 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DffbO54788 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
DffbO54788 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DffbO54788 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
DffbO54788 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DffbO54788 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DffbO54788 Gm8503-201ENSMUST00000118131 455 ntBASIC18.79■□□□□ 0.6
DffbO54788 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DffbO54788 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DffbO54788 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.78■□□□□ 0.6
DffbO54788 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DffbO54788 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.78■□□□□ 0.6
DffbO54788 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DffbO54788 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.77■□□□□ 0.6
DffbO54788 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DffbO54788 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DffbO54788 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DffbO54788 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
DffbO54788 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DffbO54788 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.76■□□□□ 0.59
DffbO54788 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DffbO54788 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DffbO54788 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.76■□□□□ 0.59
DffbO54788 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DffbO54788 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DffbO54788 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
DffbO54788 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
DffbO54788 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DffbO54788 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
DffbO54788 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DffbO54788 Gm4799-201ENSMUST00000095396 657 ntBASIC18.75■□□□□ 0.59
DffbO54788 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DffbO54788 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DffbO54788 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DffbO54788 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DffbO54788 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.74■□□□□ 0.59
DffbO54788 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DffbO54788 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DffbO54788 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DffbO54788 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DffbO54788 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DffbO54788 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DffbO54788 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.74■□□□□ 0.59
DffbO54788 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DffbO54788 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.73■□□□□ 0.59
DffbO54788 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DffbO54788 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DffbO54788 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DffbO54788 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.73■□□□□ 0.59
DffbO54788 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DffbO54788 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DffbO54788 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
DffbO54788 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DffbO54788 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DffbO54788 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.72■□□□□ 0.59
DffbO54788 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DffbO54788 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DffbO54788 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DffbO54788 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DffbO54788 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms