Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Herc1E9PZP8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Herc1E9PZP8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC13.17□□□□□ -0.3
Herc1E9PZP8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC13.17□□□□□ -0.3
Herc1E9PZP8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.17□□□□□ -0.3
Herc1E9PZP8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Terc-201ENSMUST00000082862 423 ntBASIC13.15□□□□□ -0.3
Herc1E9PZP8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc1E9PZP8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc1E9PZP8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc1E9PZP8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc1E9PZP8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Herc1E9PZP8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.13□□□□□ -0.31
Herc1E9PZP8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Gm6139-201ENSMUST00000079261 882 ntBASIC13.13□□□□□ -0.31
Herc1E9PZP8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Gm27405-201ENSMUST00000184201 112 ntBASIC13.13□□□□□ -0.31
Herc1E9PZP8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc1E9PZP8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Herc1E9PZP8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc1E9PZP8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Herc1E9PZP8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.12□□□□□ -0.31
Herc1E9PZP8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc1E9PZP8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.1□□□□□ -0.31
Herc1E9PZP8 Gm44428-201ENSMUST00000204474 874 ntBASIC13.1□□□□□ -0.31
Herc1E9PZP8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc1E9PZP8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc1E9PZP8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc1E9PZP8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.09□□□□□ -0.31
Herc1E9PZP8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Herc1E9PZP8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
Herc1E9PZP8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Gm37179-201ENSMUST00000194862 823 ntBASIC13.08□□□□□ -0.32
Herc1E9PZP8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.08□□□□□ -0.32
Herc1E9PZP8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.08□□□□□ -0.32
Herc1E9PZP8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Gm26833-201ENSMUST00000180899 440 ntBASIC13.06□□□□□ -0.32
Herc1E9PZP8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.06□□□□□ -0.32
Herc1E9PZP8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.06□□□□□ -0.32
Herc1E9PZP8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms