Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Herc1E9PZP8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Herc1E9PZP8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC13.17□□□□□ -0.3
Herc1E9PZP8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC13.17□□□□□ -0.3
Herc1E9PZP8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.17□□□□□ -0.3
Herc1E9PZP8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Herc1E9PZP8 Terc-201ENSMUST00000082862 423 ntBASIC13.15□□□□□ -0.3
Herc1E9PZP8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc1E9PZP8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc1E9PZP8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Herc1E9PZP8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Herc1E9PZP8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Herc1E9PZP8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.14□□□□□ -0.31
Herc1E9PZP8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.13□□□□□ -0.31
Herc1E9PZP8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Gm6139-201ENSMUST00000079261 882 ntBASIC13.13□□□□□ -0.31
Herc1E9PZP8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Gm27405-201ENSMUST00000184201 112 ntBASIC13.13□□□□□ -0.31
Herc1E9PZP8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herc1E9PZP8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc1E9PZP8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Herc1E9PZP8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc1E9PZP8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Herc1E9PZP8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.12□□□□□ -0.31
Herc1E9PZP8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herc1E9PZP8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herc1E9PZP8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.1□□□□□ -0.31
Herc1E9PZP8 Gm44428-201ENSMUST00000204474 874 ntBASIC13.1□□□□□ -0.31
Herc1E9PZP8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc1E9PZP8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc1E9PZP8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Herc1E9PZP8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.09□□□□□ -0.31
Herc1E9PZP8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Herc1E9PZP8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Herc1E9PZP8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
Herc1E9PZP8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 Gm37179-201ENSMUST00000194862 823 ntBASIC13.08□□□□□ -0.32
Herc1E9PZP8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.08□□□□□ -0.32
Herc1E9PZP8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.08□□□□□ -0.32
Herc1E9PZP8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.08□□□□□ -0.32
Herc1E9PZP8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Herc1E9PZP8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Gm26833-201ENSMUST00000180899 440 ntBASIC13.06□□□□□ -0.32
Herc1E9PZP8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.06□□□□□ -0.32
Herc1E9PZP8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.06□□□□□ -0.32
Herc1E9PZP8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Herc1E9PZP8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms