Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh17E9PXF0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh17E9PXF0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh17E9PXF0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.49■□□□□ 0.87
Pcdh17E9PXF0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh17E9PXF0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh17E9PXF0 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.48■□□□□ 0.87
Pcdh17E9PXF0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh17E9PXF0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh17E9PXF0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Gm43566-201ENSMUST00000196851 808 ntBASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdh17E9PXF0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.45■□□□□ 0.86
Pcdh17E9PXF0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Gm45444-201ENSMUST00000211394 898 ntBASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh17E9PXF0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh17E9PXF0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh17E9PXF0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh17E9PXF0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh17E9PXF0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh17E9PXF0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh17E9PXF0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
Pcdh17E9PXF0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh17E9PXF0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdh17E9PXF0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh17E9PXF0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdh17E9PXF0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh17E9PXF0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh17E9PXF0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh17E9PXF0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh17E9PXF0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh17E9PXF0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh17E9PXF0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms