Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC32.17■■■□□ 2.74
Hfm1D3Z4R1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC32.17■■■□□ 2.74
Hfm1D3Z4R1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC32.16■■■□□ 2.74
Hfm1D3Z4R1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Hfm1D3Z4R1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Hfm1D3Z4R1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Hfm1D3Z4R1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Hfm1D3Z4R1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC32.15■■■□□ 2.74
Hfm1D3Z4R1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC32.14■■■□□ 2.74
Hfm1D3Z4R1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
Hfm1D3Z4R1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC32.14■■■□□ 2.74
Hfm1D3Z4R1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC32.13■■■□□ 2.73
Hfm1D3Z4R1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC32.13■■■□□ 2.73
Hfm1D3Z4R1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Hfm1D3Z4R1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Hfm1D3Z4R1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Hfm1D3Z4R1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC32.11■■■□□ 2.73
Hfm1D3Z4R1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Hfm1D3Z4R1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Hfm1D3Z4R1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC32.1■■■□□ 2.73
Hfm1D3Z4R1 Gm7199-201ENSMUST00000118327 1485 ntBASIC32.1■■■□□ 2.73
Hfm1D3Z4R1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Hfm1D3Z4R1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC32.09■■■□□ 2.73
Hfm1D3Z4R1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Hfm1D3Z4R1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Hfm1D3Z4R1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Hfm1D3Z4R1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Hfm1D3Z4R1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Hfm1D3Z4R1 Gm16464-201ENSMUST00000117815 1095 ntBASIC32.07■■■□□ 2.72
Hfm1D3Z4R1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC32.07■■■□□ 2.72
Hfm1D3Z4R1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Hfm1D3Z4R1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC32.06■■■□□ 2.72
Hfm1D3Z4R1 Amer2-203ENSMUST00000225247 2662 ntBASIC32.06■■■□□ 2.72
Hfm1D3Z4R1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
Hfm1D3Z4R1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC32.05■■■□□ 2.72
Hfm1D3Z4R1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
Hfm1D3Z4R1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
Hfm1D3Z4R1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Hfm1D3Z4R1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
Hfm1D3Z4R1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Hfm1D3Z4R1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC32.02■■■□□ 2.72
Hfm1D3Z4R1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Hfm1D3Z4R1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC32.01■■■□□ 2.72
Hfm1D3Z4R1 Gm13241-201ENSMUST00000094493 780 ntBASIC32.01■■■□□ 2.72
Hfm1D3Z4R1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Hfm1D3Z4R1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC32.01■■■□□ 2.71
Hfm1D3Z4R1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC31.99■■■□□ 2.71
Hfm1D3Z4R1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Hfm1D3Z4R1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Hfm1D3Z4R1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Hfm1D3Z4R1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Hfm1D3Z4R1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Hfm1D3Z4R1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Hfm1D3Z4R1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Hfm1D3Z4R1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC31.96■■■□□ 2.71
Hfm1D3Z4R1 Gm21956-201ENSMUST00000179946 522 ntBASIC31.95■■■□□ 2.71
Hfm1D3Z4R1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Hfm1D3Z4R1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Hfm1D3Z4R1 Gm7417-201ENSMUST00000192950 473 ntBASIC31.93■■■□□ 2.7
Hfm1D3Z4R1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Hfm1D3Z4R1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Hfm1D3Z4R1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Hfm1D3Z4R1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Hfm1D3Z4R1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Hfm1D3Z4R1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Hfm1D3Z4R1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Hfm1D3Z4R1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Hfm1D3Z4R1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC31.9■■■□□ 2.7
Hfm1D3Z4R1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Hfm1D3Z4R1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC31.89■■■□□ 2.7
Hfm1D3Z4R1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Hfm1D3Z4R1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC31.89■■■□□ 2.7
Hfm1D3Z4R1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Hfm1D3Z4R1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Hfm1D3Z4R1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC31.88■■■□□ 2.69
Hfm1D3Z4R1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Hfm1D3Z4R1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Hfm1D3Z4R1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Hfm1D3Z4R1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Hfm1D3Z4R1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC31.86■■■□□ 2.69
Hfm1D3Z4R1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Hfm1D3Z4R1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC31.85■■■□□ 2.69
Hfm1D3Z4R1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Hfm1D3Z4R1 Gm43034-201ENSMUST00000198678 1364 ntBASIC31.85■■■□□ 2.69
Hfm1D3Z4R1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Hfm1D3Z4R1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Hfm1D3Z4R1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Hfm1D3Z4R1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Hfm1D3Z4R1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Hfm1D3Z4R1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Hfm1D3Z4R1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
Hfm1D3Z4R1 Gm22238-201ENSMUST00000175222 88 ntBASIC31.83■■■□□ 2.69
Hfm1D3Z4R1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC31.83■■■□□ 2.69
Hfm1D3Z4R1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Hfm1D3Z4R1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Hfm1D3Z4R1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Hfm1D3Z4R1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Hfm1D3Z4R1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC31.83■■■□□ 2.69
Hfm1D3Z4R1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.69
Hfm1D3Z4R1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms