Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp27D3YV89 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp27D3YV89 Gm11599-201ENSMUST00000118720 878 ntBASIC18.55■□□□□ 0.56
Mmp27D3YV89 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
Mmp27D3YV89 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp27D3YV89 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Mmp27D3YV89 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp27D3YV89 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp27D3YV89 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.54■□□□□ 0.56
Mmp27D3YV89 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.53■□□□□ 0.56
Mmp27D3YV89 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp27D3YV89 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Mmp27D3YV89 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Mmp27D3YV89 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp27D3YV89 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp27D3YV89 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp27D3YV89 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp27D3YV89 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp27D3YV89 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp27D3YV89 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp27D3YV89 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp27D3YV89 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Mmp27D3YV89 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp27D3YV89 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp27D3YV89 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp27D3YV89 Particl-201ENSMUST00000205370 1560 ntBASIC18.51■□□□□ 0.55
Mmp27D3YV89 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Mmp27D3YV89 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.51■□□□□ 0.55
Mmp27D3YV89 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp27D3YV89 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.51■□□□□ 0.55
Mmp27D3YV89 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp27D3YV89 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp27D3YV89 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.51■□□□□ 0.55
Mmp27D3YV89 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp27D3YV89 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp27D3YV89 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp27D3YV89 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp27D3YV89 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp27D3YV89 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp27D3YV89 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp27D3YV89 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp27D3YV89 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp27D3YV89 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp27D3YV89 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp27D3YV89 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp27D3YV89 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp27D3YV89 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Mmp27D3YV89 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp27D3YV89 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Mmp27D3YV89 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.48■□□□□ 0.55
Mmp27D3YV89 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp27D3YV89 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Mmp27D3YV89 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp27D3YV89 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp27D3YV89 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Mmp27D3YV89 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp27D3YV89 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Mmp27D3YV89 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.47■□□□□ 0.55
Mmp27D3YV89 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.47■□□□□ 0.55
Mmp27D3YV89 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Mmp27D3YV89 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.46■□□□□ 0.55
Mmp27D3YV89 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp27D3YV89 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp27D3YV89 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp27D3YV89 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp27D3YV89 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp27D3YV89 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp27D3YV89 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp27D3YV89 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp27D3YV89 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp27D3YV89 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp27D3YV89 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp27D3YV89 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Mmp27D3YV89 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Mmp27D3YV89 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp27D3YV89 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.42■□□□□ 0.54
Mmp27D3YV89 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp27D3YV89 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp27D3YV89 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp27D3YV89 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp27D3YV89 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.4■□□□□ 0.54
Mmp27D3YV89 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.4■□□□□ 0.54
Mmp27D3YV89 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mmp27D3YV89 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Mmp27D3YV89 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp27D3YV89 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp27D3YV89 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp27D3YV89 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Mmp27D3YV89 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp27D3YV89 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp27D3YV89 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.38■□□□□ 0.53
Mmp27D3YV89 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms