Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ptchd4B9EKX1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.05■■□□□ 1.44
Ptchd4B9EKX1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptchd4B9EKX1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ptchd4B9EKX1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptchd4B9EKX1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptchd4B9EKX1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptchd4B9EKX1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptchd4B9EKX1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Ptchd4B9EKX1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptchd4B9EKX1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptchd4B9EKX1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptchd4B9EKX1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Ptchd4B9EKX1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptchd4B9EKX1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptchd4B9EKX1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Ptchd4B9EKX1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ptchd4B9EKX1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
Ptchd4B9EKX1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ptchd4B9EKX1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24■■□□□ 1.43
Ptchd4B9EKX1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ptchd4B9EKX1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ptchd4B9EKX1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ptchd4B9EKX1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ptchd4B9EKX1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptchd4B9EKX1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptchd4B9EKX1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptchd4B9EKX1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptchd4B9EKX1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.99■■□□□ 1.43
Ptchd4B9EKX1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Ptchd4B9EKX1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
Ptchd4B9EKX1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Ptchd4B9EKX1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptchd4B9EKX1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptchd4B9EKX1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptchd4B9EKX1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptchd4B9EKX1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ptchd4B9EKX1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ptchd4B9EKX1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ptchd4B9EKX1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.97■■□□□ 1.43
Ptchd4B9EKX1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ptchd4B9EKX1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptchd4B9EKX1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.96■■□□□ 1.43
Ptchd4B9EKX1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ptchd4B9EKX1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Ptchd4B9EKX1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ptchd4B9EKX1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Ptchd4B9EKX1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ptchd4B9EKX1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ptchd4B9EKX1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.95■■□□□ 1.42
Ptchd4B9EKX1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ptchd4B9EKX1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Ptchd4B9EKX1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ptchd4B9EKX1 Rps24-207ENSMUST00000224568 714 ntBASIC23.94■■□□□ 1.42
Ptchd4B9EKX1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.94■■□□□ 1.42
Ptchd4B9EKX1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ptchd4B9EKX1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ptchd4B9EKX1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Ptchd4B9EKX1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptchd4B9EKX1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
Ptchd4B9EKX1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptchd4B9EKX1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ptchd4B9EKX1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ptchd4B9EKX1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.91■■□□□ 1.42
Ptchd4B9EKX1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Ptchd4B9EKX1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ptchd4B9EKX1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
Ptchd4B9EKX1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptchd4B9EKX1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptchd4B9EKX1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ptchd4B9EKX1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.89■■□□□ 1.42
Ptchd4B9EKX1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Ptchd4B9EKX1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptchd4B9EKX1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.89■■□□□ 1.41
Ptchd4B9EKX1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptchd4B9EKX1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptchd4B9EKX1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptchd4B9EKX1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ptchd4B9EKX1 Gm45102-201ENSMUST00000207427 857 ntBASIC23.88■■□□□ 1.41
Ptchd4B9EKX1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Ptchd4B9EKX1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ptchd4B9EKX1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptchd4B9EKX1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ptchd4B9EKX1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms